RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 GUCY1A3Q02108 690 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 FAM50AQ14320 339 aaKnown RBP5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 SEPT7Q16181 437 aaKnown RBP5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 CT47A1Q5JQC4 288 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 RCSD1Q6JBY9 416 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 PKN3Q6P5Z2 889 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 MAMDC2Q7Z304 686 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 KRT26Q7Z3Y9 468 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 THAP5Q7Z6K1 395 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 NAT16Q8N8M0 369 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 RCBTB1Q8NDN9 531 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 TMEM52Q8NDY8 209 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 DCAF4Q8WV16 495 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 DIO2Q92813 273 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 MAGEB10Q96LZ2 347 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 PTCHD1Q96NR3 888 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 BTG4Q9NY30 223 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 RNF112Q9ULX5 631 aa5.48□□□□□ -1.53
HMGB1P17-201ENST00000403495 KCNQ2O43526 872 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 EFCAB14O75071 495 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 PAMP19021 973 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 LTBRP36941 435 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 CEBPAP49715 358 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 IKZF1Q13422 519 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 PRSS36Q5K4E3 855 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 PIK3R6Q5UE93 754 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 EEF1DP3Q658K8 133 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 RNF111Q6ZNA4 994 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 LHFPL2Q6ZUX7 228 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 DDX42Q86XP3 938 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 STAG1Q8WVM7 1258 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 DDX1Q92499 740 aaKnown RBP5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 HRASLS5Q96KN8 279 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 MTFR1LQ9H019 292 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 SEMA6BQ9H3T3 888 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 CAAP1Q9H8G2 361 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 CARS2Q9HA77 564 aaKnown RBP5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 PRDM7Q9NQW5 492 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 ERVK13-1Q9NX77 482 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 EBF1Q9UH73 591 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 COQ6Q9Y2Z9 468 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 PCDHA2Q9Y5H9 948 aa5.47□□□□□ -1.53
HMGB1P17-201ENST00000403495 MED26O95402 600 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 ASLP04424 464 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 KCNA6P17658 529 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 GPR85P60893 370 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 NFKB2Q00653 900 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 STRN3Q13033 797 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 ACBD5Q5T8D3 534 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 CDCA2Q69YH5 1023 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 CHAMP1Q96JM3 812 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 BRINP2Q9C0B6 783 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 ATP8A1Q9Y2Q0 1164 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 NPFFR2Q9Y5X5 522 aa5.46□□□□□ -1.54
HMGB1P17-201ENST00000403495 C7orf72A4D263 438 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 AQP7O14520 342 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 GLRX3O76003 335 aaKnown RBP5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 CDK11BP21127 795 aaKnown RBP5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 SOX5P35711 763 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 IGFALSP35858 605 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 BCL6P41182 706 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 KIR3DS1Q14943 382 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 MSMPQ1L6U9 139 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 CFAP100Q494V2 611 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 RALGPS1Q5JS13 557 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 LBX2Q6XYB7 198 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 TMPRSS7Q7RTY8 843 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 SPRED2Q7Z698 418 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 ZC3H7AQ8IWR0 971 aaKnown RBP5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 IFNL3Q8IZI9 196 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 NXPE1Q8N323 547 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 IGSF22Q8N9C0 903 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 KCNJ15Q99712 375 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 ADAMTS10Q9H324 1103 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 IPPKQ9H8X2 491 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 GPR27Q9NS67 375 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 SLAMF8Q9P0V8 285 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 GULP1Q9UBP9 304 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 SNX11Q9Y5W9 270 aa5.45□□□□□ -1.54
HMGB1P17-201ENST00000403495 ZNF891A8MT65 544 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 PPP1R11O60927 126 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 USP2O75604 605 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 CD8BP10966 210 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 FPR2P25090 351 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 ID4P47928 161 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 DNM2P50570 870 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 PRKCQQ04759 706 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 KCNAB2Q13303 367 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 CPSF6Q16630 551 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 ZCCHC8Q6NZY4 707 aaKnown RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 NLRP10Q86W26 655 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 WFDC3Q8IUB2 231 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 AFAP1L2Q8N4X5 818 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 CISD2Q8N5K1 135 aaKnown RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 ATL2Q8NHH9 583 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 PCDH19Q8TAB3 1148 aa5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 BCL7CQ8WUZ0 217 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P17-201ENST00000403495 ASB11Q8WXH4 323 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms