RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 SPAG1Q07617 926 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 OR8K1Q8NGG5 319 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 SNX29Q8TEQ0 813 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 CCDC47Q96A33 483 aaKnown RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 NAPGQ99747 312 aaPredicted RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 JADE2Q9NQC1 790 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 ZNF185O15231 689 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 IPO7O95373 1038 aaKnown RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 TNNT3P45378 269 aaPredicted RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 PPARDQ03181 441 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 TRMT1LQ7Z2T5 733 aaKnown RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 KIAA0825Q8IV33 1275 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 GSPT2Q8IYD1 628 aaKnown RBP12.4□□□□□ -0.42
SCFD2-202ENST00000401642 TRIM9Q9C026 710 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 DBNDD1Q9H9R9 158 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 USP40Q9NVE5 1235 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 CDC23Q9UJX2 597 aa12.4□□□□□ -0.42
SCFD2-202ENST00000401642 USP17L15C9J2P7 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L13C9JLJ4 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L11C9JVI0 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L19D6RCP7 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L20D6RJB6 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 KLRC4O43908 158 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 TBC1D8O95759 1140 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 GNA11P29992 359 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 CXCR5P32302 372 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 APBA1Q02410 837 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 SMC1AQ14683 1233 aaKnown RBP12.39□□□□□ -0.43
SCFD2-202ENST00000401642 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L6PQ6QN14 398 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 SLC30A10Q6XR72 485 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 TBC1D16Q8TBP0 767 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 CCDC102AQ96A19 550 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 DDX4Q9NQI0 724 aaKnown RBP12.39□□□□□ -0.43
SCFD2-202ENST00000401642 ZNHIT6Q9NWK9 470 aaKnown RBP12.39□□□□□ -0.43
SCFD2-202ENST00000401642 SRGAP1Q7Z6B7 1085 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 GPR161Q8N6U8 529 aaKnown RBP12.39□□□□□ -0.43
SCFD2-202ENST00000401642 ZNF622Q969S3 477 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■□□□□ 8.5
SCFD2-202ENST00000401642 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
SCFD2-202ENST00000401642 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 CTAGE15A4D2H0 777 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 N4BP1O75113 896 aaKnown RBP12.38□□□□□ -0.43
SCFD2-202ENST00000401642 CTAGE8P0CG41 777 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 VPS72Q15906 364 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 KCNK18Q7Z418 384 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 CTAGE6Q86UF2 777 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 C2CD5Q86YS7 1000 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 CTAGE4Q8IX94 777 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 P2RX5Q93086 422 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 DUSP9Q99956 384 aaKnown RBP12.38□□□□□ -0.43
SCFD2-202ENST00000401642 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
SCFD2-202ENST00000401642 SMARCAL1Q9NZC9 954 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 REXO2Q9Y3B8 237 aaKnown RBP12.38□□□□□ -0.43
SCFD2-202ENST00000401642 RCCD1A6NED2 376 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 MYMKA6NI61 221 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 TUBB4AP04350 444 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
SCFD2-202ENST00000401642 NFIAQ12857 509 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 USH1GQ495M9 461 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 PDE11AQ9HCR9 933 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 ABCB6Q9NP58 842 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 LGALS16A8MUM7 142 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 PDHBP11177 359 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 GYS1P13807 737 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 ARHGAP25P42331 645 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 ADCY7P51828 1080 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 RNASE9P60153 205 aaKnown RBP12.38□□□□□ -0.43
SCFD2-202ENST00000401642 TAF3Q5VWG9 929 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 SV2BQ7L1I2 683 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 SEPT12Q8IYM1 358 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
SCFD2-202ENST00000401642 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
SCFD2-202ENST00000401642 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 MYH8P13535 1937 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 EPHB6O15197 1021 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 STAT3P40763 770 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 RHBDL3P58872 404 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 VSNL1P62760 191 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
SCFD2-202ENST00000401642 TTI2Q6NXR4 508 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
SCFD2-202ENST00000401642 MYO6Q9UM54 1294 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 MEIS1O00470 390 aa12.37□□□□□ -0.43
SCFD2-202ENST00000401642 KRT18P05783 430 aaKnown RBP12.37□□□□□ -0.43
SCFD2-202ENST00000401642 C16orf86Q6ZW13 317 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms