RNA–Protein interactions for RNA: ENST00000401088.8

SZRD1-201, Transcript of SUZ RNA binding domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SZRD1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SZRD1-201ENST00000401088 BIRC3Q13489 604 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 PDCD2Q16342 344 aaPredicted RBP13.55□□□□□ -0.24
SZRD1-201ENST00000401088 NBPF5PQ86XG9 351 aaPredicted RBP13.55□□□□□ -0.24
SZRD1-201ENST00000401088 MDM1Q8TC05 714 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 SLC39A2Q9NP94 309 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 HOMER3Q9NSC5 361 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 MLH3Q9UHC1 1453 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 TRAPPC3O43617 180 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 PLEKP08567 350 aaPredicted RBP13.55□□□□□ -0.24
SZRD1-201ENST00000401088 UBA7P41226 1012 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 KLK7P49862 253 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 XRCC4Q13426 336 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 C11orf91Q3C1V1 193 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 MFSD6Q6ZSS7 791 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 DNAJC7Q99615 494 aa13.55□□□□□ -0.24
SZRD1-201ENST00000401088 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
SZRD1-201ENST00000401088 PAPOLBQ9NRJ5 636 aaKnown RBP13.55□□□□□ -0.24
SZRD1-201ENST00000401088 FMNL1O95466 1100 aaPredicted RBP13.54□□□□□ -0.24
SZRD1-201ENST00000401088 CTCFP49711 727 aaPredicted RBP13.54□□□□□ -0.24
SZRD1-201ENST00000401088 PTGDRQ13258 359 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
SZRD1-201ENST00000401088 SLC4A4Q9Y6R1 1079 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 KCNK3O14649 394 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 MTMR3Q13615 1198 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 CDC37Q16543 378 aaPredicted RBP13.54□□□□□ -0.24
SZRD1-201ENST00000401088 SPRED3Q2MJR0 410 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 TTC38Q5R3I4 469 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 WDR59Q6PJI9 974 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 FAM205CA6NFA0 338 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 GNAT1P11488 350 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 PRPHP41219 470 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 PAPOLAP51003 745 aaKnown RBP13.54□□□□□ -0.24
SZRD1-201ENST00000401088 MAB21L3Q8N8X9 362 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
SZRD1-201ENST00000401088 AGAP11Q8TF27 550 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 CASKIN2Q8WXE0 1202 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 DPH5Q9H2P9 285 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 TMBIM4Q9HC24 238 aa13.54□□□□□ -0.24
SZRD1-201ENST00000401088 PACSIN2Q9UNF0 486 aaPredicted RBP13.54□□□□□ -0.24
SZRD1-201ENST00000401088 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
SZRD1-201ENST00000401088 MMEP08473 750 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 CTDSPL2Q05D32 466 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 PRPF4BQ13523 1007 aaKnown RBP13.53□□□□□ -0.24
SZRD1-201ENST00000401088 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 A0A087X0B3 334 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 A0A1W2PQC6 194 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 MGRN1O60291 552 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 PRDM1O75626 825 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 IFNAR1P17181 557 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 NLRP5P59047 1200 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 KIF2BQ8N4N8 673 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 RETREG2Q8NC44 543 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 KDM4CQ9H3R0 1056 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 INTS9Q9NV88 658 aaKnown RBP13.53□□□□□ -0.24
SZRD1-201ENST00000401088 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 CFAP73A6NFT4 308 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 HSD17B3P37058 310 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
SZRD1-201ENST00000401088 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
SZRD1-201ENST00000401088 C6orf89Q6UWU4 347 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 PI16Q6UXB8 463 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
SZRD1-201ENST00000401088 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 NLRC4Q9NPP4 1024 aa13.53□□□□□ -0.24
SZRD1-201ENST00000401088 EYA2O00167 538 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 DNAJC8O75937 253 aaPredicted RBP13.52□□□□□ -0.24
SZRD1-201ENST00000401088 LAMB3Q13751 1172 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 UHMK1Q8TAS1 419 aaKnown RBP13.52□□□□□ -0.24
SZRD1-201ENST00000401088 MGARPQ8TDB4 240 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 PSMD1Q99460 953 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 PAGR1Q9BTK6 254 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 RNF14Q9UBS8 474 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 ATP8A1Q9Y2Q0 1164 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 ABCC6O95255 1503 aa13.52□□□□□ -0.24
SZRD1-201ENST00000401088 ATP2A2P16615 1042 aaKnown RBP13.52□□□□□ -0.25
SZRD1-201ENST00000401088 FECHP22830 423 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 GBP1P32455 592 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 EPS15P42566 896 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 TLDC1Q6P9B6 456 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 C3orf20Q8ND61 904 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
SZRD1-201ENST00000401088 PANK4Q9NVE7 773 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 SH3BP1Q9Y3L3 701 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 METP08581 1390 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 RPS6KA3P51812 740 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 RPS6KA1Q15418 735 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 TRADDQ15628 312 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 HOOK3Q86VS8 718 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 ZFATQ9P243 1243 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.25
SZRD1-201ENST00000401088 PALLDQ8WX93 1383 aa13.52□□□□□ -0.25
SZRD1-201ENST00000401088 RASSF10A6NK89 507 aa13.51□□□□□ -0.25
SZRD1-201ENST00000401088 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
SZRD1-201ENST00000401088 RBM5P52756 815 aaKnown RBP eCLIP13.51□□□□□ -0.25
SZRD1-201ENST00000401088 ITIH3Q06033 890 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms