RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TRIM14Q14142 442 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 HLTFQ14527 1009 aaKnown RBP eCLIP18.96■□□□□ 0.63
PTPRA-205ENST00000399903 ENOX2Q16206 610 aaKnown RBP18.96■□□□□ 0.63
PTPRA-205ENST00000399903 HAUS2Q9NVX0 235 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 BAZ2BQ9UIF8 2168 aaKnown RBP18.96■□□□□ 0.63
PTPRA-205ENST00000399903 FAM153BP0C7A2 387 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 MCM7P33993 719 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 PRCPP42785 496 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 EPHB4P54760 987 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 WTAPQ15007 396 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 FAM153CQ494X1 144 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 NAIF1Q69YI7 327 aaPredicted RBP18.96■□□□□ 0.63
PTPRA-205ENST00000399903 WDR59Q6PJI9 974 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 EPB41L5Q9HCM4 733 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 LIMA1Q9UHB6 759 aaKnown RBP18.96■□□□□ 0.63
PTPRA-205ENST00000399903 FAM153AQ9UHL3 310 aa18.96■□□□□ 0.63
PTPRA-205ENST00000399903 ITIH6Q6UXX5 1313 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 TACC1O75410 805 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 CARSP49589 748 aaKnown RBP18.95■□□□□ 0.62
PTPRA-205ENST00000399903 PTPROQ16827 1216 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 NLRP14Q86W24 1093 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 MB21D1Q8N884 522 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 CCNL1Q9UK58 526 aaPredicted RBP18.95■□□□□ 0.62
PTPRA-205ENST00000399903 USP21Q9UK80 565 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 MINPP1Q9UNW1 487 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 TBC1D8BQ0IIM8 1120 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 MIEF2Q96C03 454 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 TMEM87BQ96K49 555 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 STIM2Q9P246 746 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 EZRP15311 586 aaKnown RBP18.95■□□□□ 0.62
PTPRA-205ENST00000399903 PEX19P40855 299 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 SNCBQ16143 134 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 TXNRD3Q86VQ6 643 aa18.95■□□□□ 0.62
PTPRA-205ENST00000399903 PROCA1Q8NCQ7 364 aaPredicted RBP18.95■□□□□ 0.62
PTPRA-205ENST00000399903 AKR1B10O60218 316 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 PTGDRQ13258 359 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 FOXP1Q9H334 677 aaPredicted RBP18.94■□□□□ 0.62
PTPRA-205ENST00000399903 MTIF2P46199 727 aaKnown RBP18.94■□□□□ 0.62
PTPRA-205ENST00000399903 MFSD6Q6ZSS7 791 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 SETDB2Q96T68 719 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 EPN3Q9H201 632 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 PPP1R37O75864 691 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 FSBPO95073 299 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 IFNAR1P17181 557 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 BARGINQ6ZT62 677 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 SPATA20Q8TB22 786 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 IFIH1Q9BYX4 1025 aaKnown RBP18.94■□□□□ 0.62
PTPRA-205ENST00000399903 RBM12Q9NTZ6 932 aaKnown RBP18.94■□□□□ 0.62
PTPRA-205ENST00000399903 BAIAP2L1Q9UHR4 511 aa18.94■□□□□ 0.62
PTPRA-205ENST00000399903 PLCH1Q4KWH8 1693 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 GOLGA6L10A6NI86 522 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 USO1O60763 962 aaKnown RBP18.93■□□□□ 0.62
PTPRA-205ENST00000399903 DEXIO95424 95 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 CREG2Q8IUH2 290 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 OR2W6PQ8NHA6 318 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 MYCBPAPQ8TBZ2 947 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 SNX12Q9UMY4 172 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 XDHP47989 1333 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 OPLAHO14841 1288 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 PMS1P54277 932 aaKnown RBP18.93■□□□□ 0.62
PTPRA-205ENST00000399903 C2CD5Q86YS7 1000 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 ZNF579Q8NAF0 562 aaKnown RBP18.93■□□□□ 0.62
PTPRA-205ENST00000399903 ZNF512BQ96KM6 892 aaPredicted RBP18.93■□□□□ 0.62
PTPRA-205ENST00000399903 MYH3P11055 1940 aa18.93■□□□□ 0.62
PTPRA-205ENST00000399903 AATFQ9NY61 560 aaKnown RBP eCLIP18.92■□□□□ 0.62
PTPRA-205ENST00000399903 RWDD2AQ9UIY3 292 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 MCM8Q9UJA3 840 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 V9GY48 417 aaPredicted RBP18.92■□□□□ 0.62
PTPRA-205ENST00000399903 SEMA3EO15041 775 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 HEXIM1O94992 359 aaKnown RBP18.92■□□□□ 0.62
PTPRA-205ENST00000399903 SATB1Q01826 763 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 TRADDQ15628 312 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 FAM84BQ96KN1 310 aaPredicted RBP18.92■□□□□ 0.62
PTPRA-205ENST00000399903 OSBPL9Q96SU4 736 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 FAM207AQ9NSI2 230 aaPredicted RBP18.92■□□□□ 0.62
PTPRA-205ENST00000399903 MTMR7Q9Y216 660 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 TMOD1P28289 359 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 PTGISQ16647 500 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 KLHL7Q8IXQ5 586 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 VCPKMTQ9H867 229 aa18.92■□□□□ 0.62
PTPRA-205ENST00000399903 DDX20Q9UHI6 824 aaKnown RBP18.92■□□□□ 0.62
PTPRA-205ENST00000399903 AHDC1Q5TGY3 1603 aaPredicted RBP18.91■□□□□ 0.62
PTPRA-205ENST00000399903 RPN1P04843 607 aaKnown RBP18.91■□□□□ 0.62
PTPRA-205ENST00000399903 AKNAD1Q5T1N1 836 aa18.91■□□□□ 0.62
PTPRA-205ENST00000399903 PARP9Q8IXQ6 854 aa18.91■□□□□ 0.62
PTPRA-205ENST00000399903 ARHGEF1Q92888 912 aaKnown RBP18.91■□□□□ 0.62
PTPRA-205ENST00000399903 ZNF233A6NK53 670 aa18.91■□□□□ 0.62
PTPRA-205ENST00000399903 XBP1P17861 261 aa18.91■□□□□ 0.62
PTPRA-205ENST00000399903 CDC25CP30307 473 aa18.91■□□□□ 0.62
PTPRA-205ENST00000399903 ALS2CLQ60I27 953 aa18.91■□□□□ 0.62
PTPRA-205ENST00000399903 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
PTPRA-205ENST00000399903 CRACR2BQ8N4Y2 399 aaPredicted RBP18.91■□□□□ 0.62
PTPRA-205ENST00000399903 PRDX5P30044 214 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 MEX3CQ5U5Q3 659 aaKnown RBP18.9■□□□□ 0.62
PTPRA-205ENST00000399903 HAUS3Q68CZ6 603 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 ZNF384Q8TF68 577 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 EIF4E1BA6NMX2 242 aaKnown RBP18.9■□□□□ 0.62
PTPRA-205ENST00000399903 GLI1P08151 1106 aa18.9■□□□□ 0.62
PTPRA-205ENST00000399903 KRT2P35908 639 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms