RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ZNF532Q9HCE3 1301 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 PRDM15P57071 1507 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 ZNF233A6NK53 670 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 MAP3K7CLP57077 242 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 DNAJC25Q9H1X3 360 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 TRPC7Q9HCX4 862 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 H0YC42 278 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 NVLO15381 856 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 DNM1Q05193 864 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 DCAF4L1Q3SXM0 396 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 SDE2Q6IQ49 451 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 REXO1Q8N1G1 1221 aaKnown RBP11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 MCUQ8NE86 351 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 TSGA10Q9BZW7 698 aa11.97□□□□□ -0.49
CACNA1C-216ENST00000399638 GPAA1O43292 621 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 ESRRBO95718 433 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 CACTINQ8WUQ7 758 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 LRRC4Q9HBW1 653 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 ATP8A2Q9NTI2 1148 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 RAB20Q9NX57 234 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 TAF1CQ15572 869 aaPredicted RBP11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 AFAP1L1Q8TED9 768 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 MYL10Q9BUA6 226 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 REREQ9P2R6 1566 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 USP19O94966 1318 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 NPR1P16066 1061 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 PRKCQQ04759 706 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 LGSNQ5TDP6 509 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 GPBP1Q86WP2 473 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 CCDC26Q8TAB7 109 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 MGARPQ8TDB4 240 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 HAUS1Q96CS2 278 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 SMYD2Q9NRG4 433 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
CACNA1C-216ENST00000399638 OPHN1O60890 802 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 ATL3Q6DD88 541 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 ABTB1Q969K4 478 aaPredicted RBP11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 MMP19Q99542 508 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 ARFGAP3Q9NP61 516 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 ZNF804BA4D1E1 1349 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 TTC38Q5R3I4 469 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 SLC7A3Q8WY07 619 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 NLRP4Q96MN2 994 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 BAG5Q9UL15 447 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.5
CACNA1C-216ENST00000399638 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 MAP3K13O43283 966 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 SRGAP2CP0DJJ0 459 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 BFSP1Q12934 665 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 DBN1Q16643 649 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 FYB2Q5VWT5 728 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 TTBK2Q6IQ55 1244 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 WRNIP1Q96S55 665 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 DNAJC7Q99615 494 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 MIS12Q9H081 205 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 PLCB1Q9NQ66 1216 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 RHOXF2BP0C7M4 288 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 IGFBP4P22692 258 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 MTERF2Q49AM1 385 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 JADE1Q6IE81 842 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 CTAGE3PQ8IX95 158 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 RHOXF2Q9BQY4 288 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 ZNF341Q9BYN7 854 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 LZTFL1Q9NQ48 299 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 TBC1D8O95759 1140 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 SESN3P58005 492 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 RINT1Q6NUQ1 792 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 KLHDC4Q8TBB5 520 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 CTAGE9A4FU28 777 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 ATXN3P54252 364 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 PDLIM2Q96JY6 352 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 GIGYF1O75420 1035 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 ADCY1Q08828 1119 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 GBP6Q6ZN66 633 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 PDCD6IPQ8WUM4 868 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 MASTLQ96GX5 879 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 ZNF577Q9BSK1 485 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 SAMD15Q9P1V8 674 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 FBXL21Q9UKT6 434 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 TTC41PQ6P2S7 1318 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 BEND3Q5T5X7 828 aa11.95□□□□□ -0.5
CACNA1C-216ENST00000399638 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
CACNA1C-216ENST00000399638 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms