RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 A0A1W2PQC6 194 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 CXCR5P32302 372 aa21.81■■□□□ 1.08
COL13A1-205ENST00000398978 ZNHIT6Q9NWK9 470 aaKnown RBP21.81■■□□□ 1.08
COL13A1-205ENST00000398978 EZH2Q15910 746 aaKnown RBP21.8■■□□□ 1.08
COL13A1-205ENST00000398978 TPTE2Q6XPS3 522 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 EXOC4Q96A65 974 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 CDCA7Q9BWT1 371 aaPredicted RBP21.8■■□□□ 1.08
COL13A1-205ENST00000398978 MYH10P35580 1976 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 POTEMA6NI47 508 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 USP17L5A8MUK1 530 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 USP14P54578 494 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 NONOQ15233 471 aaKnown RBP eCLIP21.8■■□□□ 1.08
COL13A1-205ENST00000398978 CCDC96Q2M329 555 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 C2CD5Q86YS7 1000 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 NUDT12Q9BQG2 462 aa21.8■■□□□ 1.08
COL13A1-205ENST00000398978 EIF3JO75822 258 aaKnown RBP21.79■■□□□ 1.08
COL13A1-205ENST00000398978 CDK8P49336 464 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 GNAQP50148 359 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 TUBB2AQ13885 445 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 CEP95Q96GE4 821 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 TUBB2BQ9BVA1 445 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 MMRN2Q9H8L6 949 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 LAMB1P07942 1786 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 ANKRD65E5RJM6 399 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 KRT86O43790 486 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 BTDP43251 543 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 HSP90B2PQ58FF3 399 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 AMOTL1Q8IY63 956 aa21.79■■□□□ 1.08
COL13A1-205ENST00000398978 IPO7O95373 1038 aaKnown RBP21.78■■□□□ 1.08
COL13A1-205ENST00000398978 CYLC1P35663 651 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-205ENST00000398978 DNA2P51530 1060 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 SPTY2D1Q68D10 685 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-205ENST00000398978 DHTKD1Q96HY7 919 aaPredicted RBP21.78■■□□□ 1.08
COL13A1-205ENST00000398978 KANSL2Q9H9L4 492 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 NARFQ9UHQ1 456 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 CAPN6Q9Y6Q1 641 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 TRIM66O15016 1216 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 TDP2O95551 362 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 KRT83P78385 493 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 SPATA31A5Q5VU36 1347 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 NEK8Q86SG6 692 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 SPATA31A7Q8IWB4 1347 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 SLURP2P0DP57 97 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 CCDC42Q96M95 316 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 NYXQ9GZU5 481 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 ZMYND12Q9H0C1 365 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 FAM204AQ9H8W3 233 aa21.78■■□□□ 1.08
COL13A1-205ENST00000398978 MYMKA6NI61 221 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 SLC37A4O43826 429 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 MOCS3O95396 460 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 MEA1Q16626 185 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 LRRC47Q8N1G4 583 aaKnown RBP21.77■■□□□ 1.08
COL13A1-205ENST00000398978 HDAC7Q8WUI4 952 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 BAG3O95817 575 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 ZBED6P86452 979 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 SOGA3Q5TF21 947 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 COG1Q8WTW3 980 aa21.77■■□□□ 1.08
COL13A1-205ENST00000398978 TEX11Q8IYF3 940 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
COL13A1-205ENST00000398978 TBC1D7Q9P0N9 293 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 CCDC88AQ3V6T2 1871 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 NCK2O43639 380 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 SLC7A5Q01650 507 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 DAGLBQ8NCG7 672 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 C6orf50Q9HD87 102 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 ARHGAP20Q9P2F6 1191 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
COL13A1-205ENST00000398978 COL22A1Q8NFW1 1626 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-205ENST00000398978 IRS2Q9Y4H2 1338 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 KDM4FA0A1W2PPD8 638 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 APBA1Q02410 837 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 PICALMQ13492 652 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 PAPD7Q5XG87 772 aaKnown RBP21.76■■□□□ 1.07
COL13A1-205ENST00000398978 KCNK18Q7Z418 384 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 ANKS1AQ92625 1134 aa21.76■■□□□ 1.07
COL13A1-205ENST00000398978 RRP36Q96EU6 259 aaKnown RBP21.76■■□□□ 1.07
COL13A1-205ENST00000398978 ROBO1Q9Y6N7 1651 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 RNF40O75150 1001 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 ACTN2P35609 894 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 KIF5AQ12840 1032 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 GRB10Q13322 594 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 ENOX2Q16206 610 aaKnown RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 TMED8Q6PL24 325 aaPredicted RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 TMC4Q7Z404 712 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 WDR66Q8TBY9 1149 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 CCDC47Q96A33 483 aaKnown RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 GBP3Q9H0R5 595 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 GPCPD1Q9NPB8 672 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 BLOC1S4Q9NUP1 217 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 THRAP3Q9Y2W1 955 aaKnown RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 EIF4A3P38919 411 aaKnown RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 KCTD19Q17RG1 926 aaPredicted RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 RRAGAQ7L523 313 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 KRT25Q7Z3Z0 450 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 C10orf67Q8IYJ2 551 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 SECISBP2LQ93073 1101 aaKnown RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 RTFDC1Q9BY42 306 aaPredicted RBP21.75■■□□□ 1.07
COL13A1-205ENST00000398978 TRIM34Q9BYJ4 488 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 RABEP2Q9H5N1 569 aa21.75■■□□□ 1.07
COL13A1-205ENST00000398978 TMEM51Q9NW97 253 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms