RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 CNNM4Q6P4Q7 775 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 CYP26C1Q6V0L0 522 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 CSGALNACT2Q8N6G5 542 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 MB21D1Q8N884 522 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 UBXN4Q92575 508 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 CUL5Q93034 780 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 P2RX5Q93086 422 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 CCDC17Q96LX7 622 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 ZDHHC15Q96MV8 337 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 DBNDD1Q9H9R9 158 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 STK17AQ9UEE5 414 aa15.52■□□□□ 0.07
PRAME-202ENST00000398743 COL11A2P13942 1736 aaPredicted RBP15.51■□□□□ 0.07
PRAME-202ENST00000398743 EFCAB8A8MWE9 144 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 ZBTB5O15062 677 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 KRT9P35527 623 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 STK4Q13043 487 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 TTBK2Q6IQ55 1244 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 SV2BQ7L1I2 683 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 ZNF622Q969S3 477 aaKnown RBP eCLIP15.51■□□□□ 0.073e-23■□□□□ 9.4
PRAME-202ENST00000398743 CDK5RAP3Q96JB5 506 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 CARD6Q9BX69 1037 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 OGFRQ9NZT2 677 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 MRFAP1Q9Y605 127 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 ADAMTSL1Q8N6G6 1762 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 MYH8P13535 1937 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 PES1O00541 588 aaKnown RBP15.51■□□□□ 0.07
PRAME-202ENST00000398743 KIF5CO60282 957 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 PPP1R11O60927 126 aaPredicted RBP15.51■□□□□ 0.07
PRAME-202ENST00000398743 CLK2P49760 499 aaKnown RBP15.51■□□□□ 0.07
PRAME-202ENST00000398743 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
PRAME-202ENST00000398743 ERVK-24P63145 666 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 GRB10Q13322 594 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 PDIA5Q14554 519 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 ARHGAP29Q52LW3 1261 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 COBLL1Q53SF7 1204 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 PPP4R3AQ6IN85 833 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
PRAME-202ENST00000398743 DDX41Q9UJV9 622 aaKnown RBP15.51■□□□□ 0.07
PRAME-202ENST00000398743 RNF225M0QZC1 329 aaPredicted RBP15.5■□□□□ 0.07
PRAME-202ENST00000398743 EDIL3O43854 480 aa15.5■□□□□ 0.07
PRAME-202ENST00000398743 TADA3O75528 432 aa15.5■□□□□ 0.07
PRAME-202ENST00000398743 FCER1AP12319 257 aa15.5■□□□□ 0.07
PRAME-202ENST00000398743 SLC16A2P36021 539 aa15.5■□□□□ 0.07
PRAME-202ENST00000398743 UBE2SQ16763 222 aa15.5■□□□□ 0.07
PRAME-202ENST00000398743 FAM114A1Q8IWE2 563 aa15.5■□□□□ 0.07
PRAME-202ENST00000398743 ZNF507Q8TCN5 953 aa15.5■□□□□ 0.07
PRAME-202ENST00000398743 LARP4BQ92615 738 aaKnown RBP15.5■□□□□ 0.07
PRAME-202ENST00000398743 DUSP9Q99956 384 aaKnown RBP15.5■□□□□ 0.07
PRAME-202ENST00000398743 DHX36Q9H2U1 1008 aaKnown RBP15.5■□□□□ 0.07
PRAME-202ENST00000398743 USP17L10C9JJH3 530 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 H2AFXP16104 143 aaPredicted RBP15.49■□□□□ 0.07
PRAME-202ENST00000398743 DNM2P50570 870 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 KRT79Q5XKE5 535 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 KIAA0825Q8IV33 1275 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 ZFPM1Q8IX07 1006 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 MTMR8Q96EF0 704 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 TUBGCP2Q9BSJ2 902 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 MRIQ9BWK5 157 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 IRX2Q9BZI1 471 aaPredicted RBP15.49■□□□□ 0.07
PRAME-202ENST00000398743 DNAJC18Q9H819 358 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 BLOC1S4Q9NUP1 217 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 POTEMA6NI47 508 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 APBA3O96018 575 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
PRAME-202ENST00000398743 STRIP1Q5VSL9 837 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 ANKRD40Q6AI12 368 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 SNX29Q8TEQ0 813 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
PRAME-202ENST00000398743 DDX25Q9UHL0 483 aaKnown RBP15.49■□□□□ 0.07
PRAME-202ENST00000398743 GREB1LQ9C091 1923 aaPredicted RBP15.48■□□□□ 0.07
PRAME-202ENST00000398743 TTC26A0AVF1 554 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 PPP2R3AQ06190 1150 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 UNC13DQ70J99 1090 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 KIAA0895Q8NCT3 520 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 ACRBPQ8NEB7 543 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 CNOT6LQ96LI5 555 aaKnown RBP15.48■□□□□ 0.07
PRAME-202ENST00000398743 PSTPIP2Q9H939 334 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 LUC7L2Q9Y383 392 aaKnown RBP15.48■□□□□ 0.07
PRAME-202ENST00000398743 A0A0U1RQJ8 604 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 PVALEFA0A1B0GWK0 134 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 B4DLN1 442 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 SLURP2P0DP57 97 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 GCFC2P16383 781 aaKnown RBP15.48■□□□□ 0.07
PRAME-202ENST00000398743 RBM5P52756 815 aaKnown RBP eCLIP15.48■□□□□ 0.07
PRAME-202ENST00000398743 CACNB3P54284 484 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 HDLBPQ00341 1268 aaKnown RBP15.48■□□□□ 0.07
PRAME-202ENST00000398743 TCP10Q12799 353 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 MCM6Q14566 821 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 C2CD5Q86YS7 1000 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 SMAP1Q8IYB5 467 aaPredicted RBP15.48■□□□□ 0.07
PRAME-202ENST00000398743 OR8K1Q8NGG5 319 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 ATRIPQ8WXE1 791 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 IDI2Q9BXS1 227 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 LRRC27Q9C0I9 530 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 GLT8D2Q9H1C3 349 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 PI4KBQ9UBF8 816 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 CAPN11Q9UMQ6 739 aa15.48■□□□□ 0.07
PRAME-202ENST00000398743 MYMKA6NI61 221 aa15.47■□□□□ 0.07
PRAME-202ENST00000398743 SLC1A4P43007 532 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms