RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 CASP14P31944 242 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 PBX1P40424 430 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 RHBDL3P58872 404 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 SKOR1P84550 965 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 IQCA1Q86XH1 822 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 CCDC51Q96ER9 411 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 PRMT6Q96LA8 375 aaPredicted RBP11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 SYT17Q9BSW7 474 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 TAOK3Q9H2K8 898 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 SNED1Q8TER0 1413 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 A6NNZ2 444 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 YBX3P16989 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 TGFB2P61812 414 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 CXCL9Q07325 125 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 MORC3Q14149 939 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 CRYMQ14894 314 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 APOBEC3HQ6NTF7 200 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 TMTC1Q8IUR5 882 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 CNGA4Q8IV77 575 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 ELOA2Q8IYF1 753 aaPredicted RBP11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
HMGCLL1-205ENST00000398661 LRRC37AA6NMS7 1700 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 CRKP46108 304 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 MRPL12P52815 198 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 ERVK-24P63145 666 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 MICALCLQ6ZW33 695 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 RBM28Q9NW13 759 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 DOCK2Q92608 1830 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 SMTNP53814 917 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 POSTNQ15063 836 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 PRAMEF18Q5VWM3 479 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 SPTY2D1Q68D10 685 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 CDC42EP5Q6NZY7 148 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 MFSD6Q6ZSS7 791 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 YTHDF3Q7Z739 585 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 MICU3Q86XE3 530 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 RPGRIP1Q96KN7 1286 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 MAP3K14Q99558 947 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 HDAC6Q9UBN7 1215 aa11.29□□□□□ -0.6
HMGCLL1-205ENST00000398661 OPA1O60313 960 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 GYPCP04921 128 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 IARSP41252 1262 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 SARSP49591 514 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 CKAP4Q07065 602 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 ACTN3Q08043 901 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 AKNAD1Q5T1N1 836 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 NT5DC1Q5TFE4 455 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 SAMD7Q7Z3H4 446 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 FBXL16Q8N461 479 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 AENQ8WTP8 325 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 ADD3Q9UEY8 706 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 FAM184BQ9ULE4 1060 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 ZMYM6O95789 1325 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 DNAH12Q6ZR08 3092 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 ENC1O14682 589 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 RASSF9O75901 435 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 PDCLQ13371 301 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 PLCB4Q15147 1175 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 NBPF9Q3BBW0 867 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 CCDC40Q4G0X9 1142 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 NAIF1Q69YI7 327 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 NCOA7Q8NI08 942 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 SLF1Q9BQI6 1058 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 SAR1BQ9Y6B6 198 aa11.28□□□□□ -0.6
HMGCLL1-205ENST00000398661 FLT1P17948 1338 aa11.27□□□□□ -0.6
HMGCLL1-205ENST00000398661 GPR75-ASB3A0A0A6YYF3 556 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 CPLX1O14810 134 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 SRGAP2O75044 1071 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 ERCC5P28715 1186 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 IRX1P78414 480 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 MAP2K1Q02750 393 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 NBPF20Q3BBV1 942 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 STRIP1Q5VSL9 837 aa11.27□□□□□ -0.61
HMGCLL1-205ENST00000398661 CYP26C1Q6V0L0 522 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms