RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ME3Q16798 604 aa18.25■□□□□ 0.51
MBD1-207ENST00000398488 NECAB1Q8N987 351 aa18.25■□□□□ 0.51
MBD1-207ENST00000398488 SYTL5Q8TDW5 730 aaPredicted RBP18.25■□□□□ 0.51
MBD1-207ENST00000398488 TINF2Q9BSI4 451 aa18.25■□□□□ 0.51
MBD1-207ENST00000398488 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
MBD1-207ENST00000398488 MRPL11Q9Y3B7 192 aaKnown RBP18.25■□□□□ 0.51
MBD1-207ENST00000398488 PFASO15067 1338 aa18.25■□□□□ 0.51
MBD1-207ENST00000398488 ST3GAL1Q11201 340 aa18.24■□□□□ 0.51
MBD1-207ENST00000398488 PKN1Q16512 942 aa18.24■□□□□ 0.51
MBD1-207ENST00000398488 WWC2Q6AWC2 1192 aa18.24■□□□□ 0.51
MBD1-207ENST00000398488 TRMT44Q8IYL2 757 aaKnown RBP18.24■□□□□ 0.51
MBD1-207ENST00000398488 RGS22Q8NE09 1264 aa18.24■□□□□ 0.51
MBD1-207ENST00000398488 SHISA4Q96DD7 197 aa18.24■□□□□ 0.51
MBD1-207ENST00000398488 TAAR1Q96RJ0 339 aa18.24■□□□□ 0.51
MBD1-207ENST00000398488 MCM3APO60318 1980 aa18.24■□□□□ 0.51
MBD1-207ENST00000398488 ADAMTS3O15072 1205 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 PFKFB2O60825 505 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 CFBP00751 764 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 CYBAP13498 195 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
MBD1-207ENST00000398488 UBXN2AP68543 259 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 MFSD14CQ5VZR4 134 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 MAMDC4Q6UXC1 1216 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 RNF208Q9H0X6 261 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 SLC5A4Q9NY91 659 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 CD2BP2O95400 341 aaKnown RBP18.23■□□□□ 0.51
MBD1-207ENST00000398488 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 IFNAR1P17181 557 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 HSD17B4P51659 736 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 GHRHRQ02643 423 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 PPP2R5BQ15173 497 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 ZNF467Q7Z7K2 595 aaPredicted RBP18.23■□□□□ 0.51
MBD1-207ENST00000398488 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
MBD1-207ENST00000398488 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.23■□□□□ 0.51
MBD1-207ENST00000398488 PAK6Q9NQU5 681 aaPredicted RBP18.23■□□□□ 0.51
MBD1-207ENST00000398488 SEC63Q9UGP8 760 aaKnown RBP18.23■□□□□ 0.51
MBD1-207ENST00000398488 RPTORQ8N122 1335 aa18.22■□□□□ 0.51
MBD1-207ENST00000398488 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
MBD1-207ENST00000398488 CCDC196A0A1B0GTZ2 297 aa18.22■□□□□ 0.51
MBD1-207ENST00000398488 ARMCX2Q7L311 632 aa18.22■□□□□ 0.51
MBD1-207ENST00000398488 HEATR3Q7Z4Q2 680 aa18.22■□□□□ 0.51
MBD1-207ENST00000398488 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
MBD1-207ENST00000398488 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.22■□□□□ 0.51
MBD1-207ENST00000398488 KIAA0100Q14667 2235 aaKnown RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 STXBP3O00186 592 aa18.21■□□□□ 0.51
MBD1-207ENST00000398488 PRPF3O43395 683 aaKnown RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 ZNF865P0CJ78 1059 aaPredicted RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 EN2P19622 333 aaPredicted RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 ALDH5A1P51649 535 aaPredicted RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
MBD1-207ENST00000398488 USP17L6PQ6QN14 398 aa18.21■□□□□ 0.51
MBD1-207ENST00000398488 DEFB118Q96PH6 123 aa18.21■□□□□ 0.51
MBD1-207ENST00000398488 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 UPF2Q9HAU5 1272 aaKnown RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 HMX1Q9NP08 348 aaPredicted RBP18.21■□□□□ 0.51
MBD1-207ENST00000398488 MEIS2O14770 477 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 PTGS1P23219 599 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 PFKFB3Q16875 520 aaPredicted RBP18.2■□□□□ 0.5
MBD1-207ENST00000398488 TMEM63BQ5T3F8 832 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 ANO1Q5XXA6 986 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 LHX8Q68G74 356 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 MORC4Q8TE76 937 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
MBD1-207ENST00000398488 ADCY6O43306 1168 aa18.19■□□□□ 0.5
MBD1-207ENST00000398488 GJB1P08034 283 aa18.19■□□□□ 0.5
MBD1-207ENST00000398488 RABEP1Q15276 862 aa18.19■□□□□ 0.5
MBD1-207ENST00000398488 EEPD1Q7L9B9 569 aa18.19■□□□□ 0.5
MBD1-207ENST00000398488 LENG1Q96BZ8 264 aaPredicted RBP18.19■□□□□ 0.5
MBD1-207ENST00000398488 AIFM3Q96NN9 605 aa18.19■□□□□ 0.5
MBD1-207ENST00000398488 LRRC37A2A6NM11 1700 aa18.19■□□□□ 0.5
MBD1-207ENST00000398488 GCOM1H8Y6P7 765 aaPredicted RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 POLR2MP0CAP2 368 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 SCG2P13521 617 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 EDNRBP24530 442 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 CNGA1P29973 690 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 UBE2SQ16763 222 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 FCHSD1Q86WN1 690 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 IL31RAQ8NI17 732 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 ZFP91Q96JP5 570 aaPredicted RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 RNF26Q9BY78 433 aaPredicted RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 PDGFCQ9NRA1 345 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 BARHL2Q9NY43 387 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 SGPL1O95470 568 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 EIF2AK2P19525 551 aaKnown RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 ACVR2BQ13705 512 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 TMEM106CQ9BVX2 250 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 ZHX1Q9UKY1 873 aaPredicted RBP18.18■□□□□ 0.5
MBD1-207ENST00000398488 LIMCH1Q9UPQ0 1083 aa18.18■□□□□ 0.5
MBD1-207ENST00000398488 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.17■□□□□ 0.5
MBD1-207ENST00000398488 ASB14A6NK59 587 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 CPLX1O14810 134 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 FDPSP14324 419 aaKnown RBP18.17■□□□□ 0.5
MBD1-207ENST00000398488 GJA8P48165 433 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 NAPAP54920 295 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms