RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SPTBN5Q9NRC6 3674 aaKnown RBP14.22□□□□□ -0.13
TFF3-202ENST00000398431 CHD9Q3L8U1 2897 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 GBF1Q92538 1859 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 ZEB2O60315 1214 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 TOP1P11387 765 aaKnown RBP14.21□□□□□ -0.13
TFF3-202ENST00000398431 PDE1AP54750 535 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 CCDC96Q2M329 555 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 TJAP1Q5JTD0 557 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 ANKRD45Q5TZF3 282 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 SYDE2Q5VT97 1194 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 WDR11Q9BZH6 1224 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 ALDH8A1Q9H2A2 487 aaPredicted RBP14.21□□□□□ -0.13
TFF3-202ENST00000398431 NKX2-4Q9H2Z4 354 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 GPCPD1Q9NPB8 672 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 MSRAQ9UJ68 235 aa14.21□□□□□ -0.13
TFF3-202ENST00000398431 FRMPD2Q68DX3 1309 aaPredicted RBP14.2□□□□□ -0.14
TFF3-202ENST00000398431 A0A0D9SFI3 127 aa14.2□□□□□ -0.14
TFF3-202ENST00000398431 PDHBP11177 359 aa14.2□□□□□ -0.14
TFF3-202ENST00000398431 RABGGTBP53611 331 aa14.2□□□□□ -0.14
TFF3-202ENST00000398431 RAB30Q15771 203 aa14.2□□□□□ -0.14
TFF3-202ENST00000398431 PPM1EQ8WY54 764 aa14.2□□□□□ -0.14
TFF3-202ENST00000398431 SCLYQ96I15 445 aa14.2□□□□□ -0.14
TFF3-202ENST00000398431 GAS2L1Q99501 681 aaPredicted RBP14.2□□□□□ -0.14
TFF3-202ENST00000398431 TRMT13Q9NUP7 481 aaKnown RBP14.2□□□□□ -0.14
TFF3-202ENST00000398431 LOC102724159A0A0B4J2E5 919 aa14.19□□□□□ -0.14
TFF3-202ENST00000398431 HSPD1P10809 573 aaKnown RBP14.19□□□□□ -0.14
TFF3-202ENST00000398431 CYP2C9P11712 490 aa14.19□□□□□ -0.14
TFF3-202ENST00000398431 MYOGP15173 224 aa14.19□□□□□ -0.14
TFF3-202ENST00000398431 PURAQ00577 322 aaKnown RBP14.19□□□□□ -0.14
TFF3-202ENST00000398431 PWP2Q15269 919 aaKnown RBP14.19□□□□□ -0.14
TFF3-202ENST00000398431 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
TFF3-202ENST00000398431 RRP12Q5JTH9 1297 aaKnown RBP14.19□□□□□ -0.14
TFF3-202ENST00000398431 SLC30A10Q6XR72 485 aa14.19□□□□□ -0.14
TFF3-202ENST00000398431 ZNF589Q86UQ0 364 aaPredicted RBP14.19□□□□□ -0.14
TFF3-202ENST00000398431 ADD3Q9UEY8 706 aaKnown RBP14.19□□□□□ -0.14
TFF3-202ENST00000398431 PTPDC1A2A3K4 754 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 EDNRBP24530 442 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 RPS6P62753 249 aaKnown RBP14.18□□□□□ -0.14
TFF3-202ENST00000398431 ZNF543Q08ER8 600 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 CCDC85BQ15834 202 aaPredicted RBP14.18□□□□□ -0.14
TFF3-202ENST00000398431 RPUSD2Q8IZ73 545 aaKnown RBP14.18□□□□□ -0.14
TFF3-202ENST00000398431 PPP1R13LQ8WUF5 828 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 ATXN2LQ8WWM7 1075 aaKnown RBP14.18□□□□□ -0.14
TFF3-202ENST00000398431 COPS5Q92905 334 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 TTC14Q96N46 770 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 MTIF3Q9H2K0 278 aaKnown RBP14.18□□□□□ -0.14
TFF3-202ENST00000398431 SLC28A3Q9HAS3 691 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 TOMM22Q9NS69 142 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 POLR3EQ9NVU0 708 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 SLC4A7Q9Y6M7 1214 aa14.18□□□□□ -0.14
TFF3-202ENST00000398431 TNKSO95271 1327 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 SCN5AQ14524 2016 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 SCN10AQ9Y5Y9 1956 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 MYL3P08590 195 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 CALML3P27482 149 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 HAND2P61296 217 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 NMIQ13287 307 aaPredicted RBP14.17□□□□□ -0.14
TFF3-202ENST00000398431 TTLL4Q14679 1199 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 NBPF20Q3BBV1 942 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 RNF207Q6ZRF8 634 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 TBC1D5Q92609 795 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 ASB2Q96Q27 587 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
TFF3-202ENST00000398431 A6NJR5 290 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 TNFRSF10AO00220 468 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 SUPT20HL2P0C7V6 817 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 IGFBP4P22692 258 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 HDAC1Q13547 482 aaPredicted RBP14.16□□□□□ -0.14
TFF3-202ENST00000398431 TICAM2Q86XR7 235 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 TBC1D10CQ8IV04 446 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 OR6J1Q8NGC5 347 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 MTG1Q9BT17 334 aaPredicted RBP14.16□□□□□ -0.14
TFF3-202ENST00000398431 CPVLQ9H3G5 476 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 PCDHA11Q9Y5I1 949 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 CHD7Q9P2D1 2997 aa14.16□□□□□ -0.14
TFF3-202ENST00000398431 ZMYM6O95789 1325 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 ARIH2O95376 493 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 CPT1AP50416 773 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 RRP1P56182 461 aaKnown RBP14.15□□□□□ -0.14
TFF3-202ENST00000398431 CCDC62Q6P9F0 684 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 MFSD6Q6ZSS7 791 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 DEFB128Q7Z7B8 93 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 RGS22Q8NE09 1264 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 DNERQ8NFT8 737 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 TET1Q8NFU7 2136 aa14.15□□□□□ -0.14
TFF3-202ENST00000398431 RFXAPO00287 272 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 NKRFO15226 690 aaKnown RBP eCLIP14.14□□□□□ -0.15
TFF3-202ENST00000398431 PFKMP08237 780 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 IQCF3P0C7M6 154 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 GOLGA8HP0CJ92 632 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 TXNP10599 105 aaKnown RBP14.14□□□□□ -0.15
TFF3-202ENST00000398431 ATP2A2P16615 1042 aaKnown RBP14.14□□□□□ -0.15
TFF3-202ENST00000398431 PDE4DQ08499 809 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 GPNMBQ14956 572 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 NFRKBQ6P4R8 1299 aa14.14□□□□□ -0.15
TFF3-202ENST00000398431 SCFD2Q8WU76 684 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms