RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 VAV1P15498 845 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 TACR1P25103 407 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 PMLP29590 882 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 BMP8BP34820 402 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 LMNB2Q03252 620 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 GNL2Q13823 731 aaKnown RBP4.37□□□□□ -1.71
CD47-203ENST00000398258 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 SMARCC2Q8TAQ2 1214 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 GATAD2BQ8WXI9 593 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 EAF1Q96JC9 268 aaPredicted RBP4.37□□□□□ -1.71
CD47-203ENST00000398258 SPATA32Q96LK8 384 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 GFOD1Q9NXC2 390 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 FBLN5Q9UBX5 448 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 FAN1Q9Y2M0 1017 aa4.37□□□□□ -1.71
CD47-203ENST00000398258 F8W031 263 aaPredicted RBP4.36□□□□□ -1.71
CD47-203ENST00000398258 NCAM1P13591 858 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 EIF4A3P38919 411 aaKnown RBP4.36□□□□□ -1.71
CD47-203ENST00000398258 RNF4P78317 190 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 PAK2Q13177 524 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 SNAP47Q5SQN1 464 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 GOLM1Q8NBJ4 401 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 CHST13Q8NET6 341 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 NT5C1AQ9BXI3 368 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 LRRC3Q9BY71 257 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 INPP5FQ9Y2H2 1132 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 ROBO2Q9HCK4 1378 aa4.36□□□□□ -1.71
CD47-203ENST00000398258 TLR3O15455 904 aaKnown RBP4.35□□□□□ -1.71
CD47-203ENST00000398258 FGRP09769 529 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 ACRP10323 421 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 ATF4P18848 351 aaPredicted RBP4.35□□□□□ -1.71
CD47-203ENST00000398258 SMAD4Q13485 552 aaKnown RBP4.35□□□□□ -1.71
CD47-203ENST00000398258 BICRALQ6AI39 1079 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 FBXL19Q6PCT2 694 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 KIAA0825Q8IV33 1275 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 ZNF296Q8WUU4 475 aaPredicted RBP4.35□□□□□ -1.71
CD47-203ENST00000398258 UBXN4Q92575 508 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 GPRASP2Q96D09 838 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 SEC16BQ96JE7 1060 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 WWC2-AS2Q96NR7 200 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 SPON2Q9BUD6 331 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 CAPN10Q9HC96 672 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 PPP4R1LQ9P1A2 415 aa4.35□□□□□ -1.71
CD47-203ENST00000398258 BPNT1O95861 308 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 SOX9P48436 509 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 ARID5AQ03989 594 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 RBL2Q08999 1139 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 COL9A2Q14055 689 aaPredicted RBP4.34□□□□□ -1.71
CD47-203ENST00000398258 R3HDM1Q15032 1099 aaKnown RBP4.34□□□□□ -1.71
CD47-203ENST00000398258 RGL3Q3MIN7 710 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 FAM196AQ6ZSG2 479 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 SLITRK4Q8IW52 837 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 PALM2Q8IXS6 379 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 ALG3Q92685 438 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 ZBTB8AQ96BR9 441 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 SLC12A9Q9BXP2 914 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 KLC2Q9H0B6 622 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 NTMQ9P121 344 aa4.34□□□□□ -1.71
CD47-203ENST00000398258 SUPT16HQ9Y5B9 1047 aaKnown RBP4.34□□□□□ -1.71
CD47-203ENST00000398258 SHOXO15266 292 aa4.33□□□□□ -1.72
CD47-203ENST00000398258 GPR42O15529 346 aa4.33□□□□□ -1.72
CD47-203ENST00000398258 VPS37DQ86XT2 251 aa4.33□□□□□ -1.72
CD47-203ENST00000398258 MCF2L2Q86YR7 1114 aa4.33□□□□□ -1.72
CD47-203ENST00000398258 TMEM192Q8IY95 271 aa4.33□□□□□ -1.72
CD47-203ENST00000398258 PDLIM7Q9NR12 457 aa4.33□□□□□ -1.72
CD47-203ENST00000398258 GLI4P10075 376 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 RAG1P15918 1043 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 CRKP46108 304 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 DIEXFQ68CQ4 756 aaKnown RBP4.32□□□□□ -1.72
CD47-203ENST00000398258 OVOS1Q6IE37 1185 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 REC114Q7Z4M0 266 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 ZNF575Q86XF7 245 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 LINC00482Q8N8I6 264 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 DNERQ8NFT8 737 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 KISS1RQ969F8 398 aaPredicted RBP4.32□□□□□ -1.72
CD47-203ENST00000398258 DDX11Q96FC9 970 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 GORASP1Q9BQQ3 440 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 TANGO6Q9C0B7 1094 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.32□□□□□ -1.72
CD47-203ENST00000398258 UBP1Q9NZI7 540 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 USP35Q9P2H5 1018 aa4.32□□□□□ -1.72
CD47-203ENST00000398258 B4GALT3O60512 393 aa4.31□□□□□ -1.72
CD47-203ENST00000398258 GSTM1P09488 218 aa4.31□□□□□ -1.72
CD47-203ENST00000398258 MPP2Q14168 576 aa4.31□□□□□ -1.72
CD47-203ENST00000398258 SPDYAQ5MJ70 313 aa4.31□□□□□ -1.72
CD47-203ENST00000398258 ZNF585AQ6P3V2 769 aa4.31□□□□□ -1.72
CD47-203ENST00000398258 REXO1Q8N1G1 1221 aaKnown RBP4.31□□□□□ -1.72
CD47-203ENST00000398258 C11orf21Q9P2W6 132 aa4.31□□□□□ -1.72
CD47-203ENST00000398258 STRIP2Q9ULQ0 834 aa4.31□□□□□ -1.72
CD47-203ENST00000398258 ZNF536O15090 1300 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 FGF10O15520 208 aaPredicted RBP4.3□□□□□ -1.72
CD47-203ENST00000398258 C8BP07358 591 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 ATP2B1P20020 1258 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 DNAJA1P31689 397 aaKnown RBP4.3□□□□□ -1.72
CD47-203ENST00000398258 APOBRQ0VD83 1088 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 CWF19L2Q2TBE0 894 aaKnown RBP4.3□□□□□ -1.72
CD47-203ENST00000398258 SEZ6Q53EL9 994 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 GLB1LQ6UWU2 654 aa4.3□□□□□ -1.72
CD47-203ENST00000398258 LGI4Q8N135 537 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms