RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 MYH1P12882 1939 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 NDUFAB1O14561 156 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 USP8P40818 1118 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 UBA7P41226 1012 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 KIF11P52732 1056 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 FKBP15Q5T1M5 1219 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 CCDC91Q7Z6B0 441 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 ZIM3Q96PE6 472 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 ZBTB1Q9Y2K1 713 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.28■□□□□ 0.68
EWSR1-206ENST00000397938 ERVV-1B6SEH8 477 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 CYP19A1P11511 503 aaPredicted RBP19.28■□□□□ 0.68
EWSR1-206ENST00000397938 C8orf74Q6P047 294 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 PRPF38AQ8NAV1 312 aaKnown RBP19.28■□□□□ 0.68
EWSR1-206ENST00000397938 PLIN2Q99541 437 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 TMEM60Q9H2L4 133 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 EHD2Q9NZN4 543 aa19.28■□□□□ 0.68
EWSR1-206ENST00000397938 DYNLL1P63167 89 aaKnown RBP19.27■□□□□ 0.68
EWSR1-206ENST00000397938 PCDHA4Q9UN74 947 aa19.27■□□□□ 0.68
EWSR1-206ENST00000397938 A0A1B0GUL6 1792 aa19.27■□□□□ 0.68
EWSR1-206ENST00000397938 NMT2O60551 498 aa19.27■□□□□ 0.67
EWSR1-206ENST00000397938 CXCR5P32302 372 aa19.27■□□□□ 0.67
EWSR1-206ENST00000397938 SPATS2Q86XZ4 545 aaKnown RBP19.27■□□□□ 0.67
EWSR1-206ENST00000397938 C2CD5Q86YS7 1000 aa19.27■□□□□ 0.67
EWSR1-206ENST00000397938 PSMB7Q99436 277 aa19.27■□□□□ 0.67
EWSR1-206ENST00000397938 MAGEF1Q9HAY2 307 aa19.27■□□□□ 0.67
EWSR1-206ENST00000397938 NKRFO15226 690 aaKnown RBP eCLIP19.26■□□□□ 0.67
EWSR1-206ENST00000397938 ZEB2O60315 1214 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 PAFAH1B1P43034 410 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 PDE4DQ08499 809 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 GLE1Q53GS7 698 aaKnown RBP19.26■□□□□ 0.67
EWSR1-206ENST00000397938 RASGRP4Q8TDF6 673 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 CUEDC2Q9H467 287 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 ORC4O43929 436 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 EIF4A3P38919 411 aaKnown RBP19.26■□□□□ 0.67
EWSR1-206ENST00000397938 PPP1R2P41236 205 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 KDM7AQ6ZMT4 941 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 DZIP3Q86Y13 1208 aaKnown RBP19.26■□□□□ 0.67
EWSR1-206ENST00000397938 SH2D3CQ8N5H7 860 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 CCDC47Q96A33 483 aaKnown RBP19.26■□□□□ 0.67
EWSR1-206ENST00000397938 SH3GLB2Q9NR46 395 aa19.26■□□□□ 0.67
EWSR1-206ENST00000397938 RBM12Q9NTZ6 932 aaKnown RBP19.26■□□□□ 0.67
EWSR1-206ENST00000397938 MNAT1P51948 309 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 APBA1Q02410 837 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 STK4Q13043 487 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 CCDC178Q5BJE1 867 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 CCDC155Q8N6L0 562 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 TRIM9Q9C026 710 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 SIK3Q9Y2K2 1263 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 COL1A1P02452 1464 aaPredicted RBP19.25■□□□□ 0.67
EWSR1-206ENST00000397938 ITGB4P16144 1822 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 M0R2N6 131 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 PJA2O43164 708 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 NCK2O43639 380 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 CLSTN1O94985 981 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 FNTAP49354 379 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 GSCP56915 257 aaPredicted RBP19.25■□□□□ 0.67
EWSR1-206ENST00000397938 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.675e-7■□□□□ 9.3
EWSR1-206ENST00000397938 SLC4A9Q96Q91 983 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 PAGR1Q9BTK6 254 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 CAPN7Q9Y6W3 813 aa19.25■□□□□ 0.67
EWSR1-206ENST00000397938 ZNF804BA4D1E1 1349 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 FLT1P17948 1338 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 CCDC194A0A1B0GVG4 234 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 EPHB6O15197 1021 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 KIAA0754O94854 1291 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 FSBPO95073 299 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 KRT14P02533 472 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 ATP1A2P50993 1020 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 IQCKQ8N0W5 287 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 TLR10Q9BXR5 811 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 LAMB1P07942 1786 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 LOC102724159A0A0B4J2E5 919 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 USP17L12C9JPN9 530 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 USP17L21D6R901 530 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 MEFVO15553 781 aaPredicted RBP19.24■□□□□ 0.67
EWSR1-206ENST00000397938 PLCG1P19174 1290 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 IGHMBP2P38935 993 aaKnown RBP19.24■□□□□ 0.67
EWSR1-206ENST00000397938 PWP2Q15269 919 aaKnown RBP19.24■□□□□ 0.67
EWSR1-206ENST00000397938 KCTD16Q68DU8 428 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 IFT20Q8IY31 132 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 GDF3Q9NR23 364 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 SALL4Q9UJQ4 1053 aa19.24■□□□□ 0.67
EWSR1-206ENST00000397938 AKR1B10O60218 316 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 KIF5BP33176 963 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 EVX2Q03828 476 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 CHRNDQ07001 517 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 CFAP58Q5T655 872 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 EMC10Q5UCC4 262 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 SUSD4Q5VX71 490 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 OTUD6BQ8N6M0 293 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 RNPC3Q96LT9 517 aaKnown RBP19.23■□□□□ 0.67
EWSR1-206ENST00000397938 CCDC43Q96MW1 224 aaKnown RBP19.23■□□□□ 0.67
EWSR1-206ENST00000397938 LAD1O00515 517 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 FCER1AP12319 257 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 LSP1P33241 339 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 PRPHP41219 470 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 ASIC1P78348 528 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 COBLL1Q53SF7 1204 aa19.23■□□□□ 0.67
EWSR1-206ENST00000397938 FAM47AQ5JRC9 791 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms