RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 IGHDP01880 384 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 CALML3P27482 149 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 ITGA7Q13683 1181 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 CCDC178Q5BJE1 867 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 PSRC1Q6PGN9 363 aaPredicted RBP16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 IQCA1Q86XH1 822 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 DGKHQ86XP1 1220 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
SNRNP25-203ENST00000397876 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.76■□□□□ 0.279e-7■■■□□ 18
SNRNP25-203ENST00000397876 CSF2RAP15509 400 aa16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 PTGS1P23219 599 aa16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 DUSP28Q4G0W2 176 aa16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 CLEC4DQ8WXI8 215 aa16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 CUL9Q8IWT3 2517 aa16.75■□□□□ 0.27
SNRNP25-203ENST00000397876 KDM4AO75164 1064 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 FOSL2P15408 326 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 DNAJB2P25686 324 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 RPS6P62753 249 aaKnown RBP16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 PDE4DQ08499 809 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 TMEM240Q5SV17 173 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 PNMA1Q8ND90 353 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 MAFAQ8NHW3 353 aaPredicted RBP16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 MYLIPQ8WY64 445 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 HIPK3Q9H422 1215 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 KAT14Q9H8E8 782 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 POLR3EQ9NVU0 708 aa16.74■□□□□ 0.27
SNRNP25-203ENST00000397876 B4DLN1 442 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 GOLGA8HP0CJ92 632 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 CYP2C18P33260 490 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 CPT1AP50416 773 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 MRPL12P52815 198 aaKnown RBP16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 IMMTQ16891 758 aaKnown RBP16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 USH1GQ495M9 461 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 TMEM63BQ5T3F8 832 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 DNERQ8NFT8 737 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 DSCC1Q9BVC3 393 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 MTIF3Q9H2K0 278 aaKnown RBP16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 IL23AQ9NPF7 189 aa16.73■□□□□ 0.27
SNRNP25-203ENST00000397876 GRIN2DO15399 1336 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 RAD50Q92878 1312 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 RBM47A0AV96 593 aaKnown RBP16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 ACRP10323 421 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 PSMC6P62333 389 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 BRDTQ58F21 947 aaPredicted RBP16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 ZNF365Q70YC5 407 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 C16orf59Q7L2K0 433 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 OR6J1Q8NGC5 347 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 TIFAQ96CG3 184 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 ZSCAN10Q96SZ4 725 aaPredicted RBP16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 UBA5Q9GZZ9 404 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 CTNNA3Q9UI47 895 aa16.72■□□□□ 0.27
SNRNP25-203ENST00000397876 B4E1Z4 1266 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 NKRFO15226 690 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 B4GALT4O60513 344 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 EDNRBP24530 442 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 CDC37Q16543 378 aaPredicted RBP16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 ASPRV1Q53RT3 343 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 RASIP1Q5U651 963 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 NOC4LQ9BVI4 516 aaKnown RBP16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 KRT23Q9C075 422 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 CPVLQ9H3G5 476 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 A0A0C4DFX4 3053 aa16.71■□□□□ 0.27
SNRNP25-203ENST00000397876 TNKSO95271 1327 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 ABCB11O95342 1321 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 DHX16O60231 1041 aaKnown RBP16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 MYL3P08590 195 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 PURAQ00577 322 aaKnown RBP16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 ENAHQ8N8S7 591 aaPredicted RBP16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 RGS22Q8NE09 1264 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 UBAC1Q9BSL1 405 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 MAF1Q9H063 256 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 CNNM2Q9H8M5 875 aa16.7■□□□□ 0.26
SNRNP25-203ENST00000397876 FGBP02675 491 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 CCL23P55773 120 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 ADGRF4Q8IZF3 695 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 HERVK_113Q902F9 699 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 ZNF576Q9H609 170 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 ZSWIM5Q9P217 1185 aa16.69■□□□□ 0.26
SNRNP25-203ENST00000397876 UNC80Q8N2C7 3258 aa16.68■□□□□ 0.26
SNRNP25-203ENST00000397876 KPNA6O60684 536 aa16.68■□□□□ 0.26
SNRNP25-203ENST00000397876 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
SNRNP25-203ENST00000397876 TTLL4Q14679 1199 aa16.68■□□□□ 0.26
SNRNP25-203ENST00000397876 GRIN2CQ14957 1233 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms