RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 USP17L2Q6R6M4 530 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 MICALCLQ6ZW33 695 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 APTXQ7Z2E3 356 aaKnown RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 ZNF579Q8NAF0 562 aaKnown RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 CAPZA3Q96KX2 299 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 HDAC6Q9UBN7 1215 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ADGRG1Q9Y653 693 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 CICQ96RK0 1608 aaPredicted RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 ZNF804BA4D1E1 1349 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 SPATA31A1Q5TZJ5 1347 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 NHSL1Q5SYE7 1610 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 CTAGE15A4D2H0 777 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 MYO1FO00160 1098 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 CYTH3O43739 400 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 KIF5CO60282 957 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 CCNT1O60563 726 aaKnown RBP5.59□□□□□ -1.52
SSR1-202ENST00000397511 MFAP3LO75121 409 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 RPN1P04843 607 aaKnown RBP5.59□□□□□ -1.52
SSR1-202ENST00000397511 CTAGE8P0CG41 777 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 EZRP15311 586 aaKnown RBP5.59□□□□□ -1.52
SSR1-202ENST00000397511 UBA7P41226 1012 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 TECP42680 631 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 IRAK1P51617 712 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 ERVK-24P63145 666 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 ATP2C1P98194 919 aaPredicted RBP5.59□□□□□ -1.52
SSR1-202ENST00000397511 TBC1D8BQ0IIM8 1120 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 PPFIA1Q13136 1202 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 PAK1Q13153 545 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 CCDC178Q5BJE1 867 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 CEP85LQ5SZL2 805 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 RCSD1Q6JBY9 416 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 CTAGE6Q86UF2 777 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 CTAGE4Q8IX94 777 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 BLIDQ8IZY5 108 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 PSMB7Q99436 277 aa5.59□□□□□ -1.52
SSR1-202ENST00000397511 DDX60Q8IY21 1712 aaKnown RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 DOT1LQ8TEK3 1739 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 SYF2O95926 243 aaKnown RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 ERCC5P28715 1186 aaPredicted RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 GCKP35557 465 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 DNA2P51530 1060 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 ATP2B2Q01814 1243 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 ICA1Q05084 483 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 GRIK3Q13003 919 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 DTHD1Q6ZMT9 781 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 CCDC50Q8IVM0 306 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 ZNF444Q8N0Y2 327 aaPredicted RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 SPATA20Q8TB22 786 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 FERMT2Q96AC1 680 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 TRIM47Q96LD4 638 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 GSDMAQ96QA5 445 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 CRACR2AQ9BSW2 395 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 BRIP1Q9BX63 1249 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 CAPS2Q9BXY5 557 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 CPSF2Q9P2I0 782 aaKnown RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 BIN2Q9UBW5 565 aaPredicted RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 FRMPD2Q68DX3 1309 aaPredicted RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 GOLGA6CA6NDK9 693 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 A6NNZ2 444 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 B4DLN1 442 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 EIF3HO15372 352 aaKnown RBP eCLIP5.58□□□□□ -1.52
SSR1-202ENST00000397511 IPO7O95373 1038 aaKnown RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 LDHBP07195 334 aaKnown RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 GOLGA6DP0CG33 693 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 FCER1AP12319 257 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 FNTAP49354 379 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 RWDD2BP57060 319 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 INHBEP58166 350 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 CYP27A1Q02318 531 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 STIM1Q13586 685 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 PFKFB3Q16875 520 aaPredicted RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 TUBB8Q3ZCM7 444 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 TCP11X2Q5H9J9 407 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 WDR93Q6P2C0 686 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 PDXDC2PQ6P474 469 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 DYMQ7RTS9 669 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 TRIML1Q8N9V2 468 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 LRRC15Q8TF66 581 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 NGLY1Q96IV0 654 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 NUCKS1Q9H1E3 243 aaKnown RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 KLC4Q9NSK0 619 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 ABHD10Q9NUJ1 306 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 AGPAT5Q9NUQ2 364 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 GOLGA6AQ9NYA3 693 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 ZBTB12Q9Y330 459 aaPredicted RBP5.58□□□□□ -1.52
SSR1-202ENST00000397511 DUSP10Q9Y6W6 482 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 ANKRD36CQ5JPF3 1778 aa5.58□□□□□ -1.52
SSR1-202ENST00000397511 TTC26A0AVF1 554 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 MACROD2A1Z1Q3 448 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CTAGE9A4FU28 777 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 RIMBP2O15034 1052 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 MYO1BO43795 1136 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CALM1P0DP23 149 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CALM2P0DP24 149 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CALM3P0DP25 149 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 TXKP42681 527 aa5.57□□□□□ -1.52
SSR1-202ENST00000397511 CCNHP51946 323 aaPredicted RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 COPB1P53618 953 aaKnown RBP5.57□□□□□ -1.52
SSR1-202ENST00000397511 NAPAP54920 295 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms