RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 B4DLN1 442 aa29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 MSCO60682 206 aa29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 RGS19P49795 217 aa29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 MRPL12P52815 198 aaKnown RBP29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 ARMCX2Q7L311 632 aa29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 TBC1D5Q92609 795 aa29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 PURBQ96QR8 312 aaKnown RBP29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 DDX20Q9UHI6 824 aaKnown RBP29.33■■■□□ 2.29
TSPAN4-207ENST00000397411 SNAI1O95863 264 aaPredicted RBP29.32■■■□□ 2.28
TSPAN4-207ENST00000397411 FGD4Q96M96 766 aa29.32■■■□□ 2.28
TSPAN4-207ENST00000397411 hCG_1642624A0A1W2PR95 340 aa29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 SEPT4O43236 478 aa29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 ACVR2BQ13705 512 aa29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 TOB2Q14106 344 aaPredicted RBP29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 LARP6Q9BRS8 491 aaKnown RBP29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 CRISPLD2Q9H0B8 497 aa29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 ABHD16BQ9H3Z7 469 aa29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 UPF2Q9HAU5 1272 aaKnown RBP29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 MCM3APO60318 1980 aa29.31■■■□□ 2.28
TSPAN4-207ENST00000397411 CDC27P30260 824 aa29.3■■■□□ 2.28
TSPAN4-207ENST00000397411 ADD1P35611 737 aaKnown RBP29.3■■■□□ 2.28
TSPAN4-207ENST00000397411 ALDH5A1P51649 535 aaPredicted RBP29.3■■■□□ 2.28
TSPAN4-207ENST00000397411 MLLT1Q03111 559 aaPredicted RBP29.3■■■□□ 2.28
TSPAN4-207ENST00000397411 ANO1Q5XXA6 986 aa29.3■■■□□ 2.28
TSPAN4-207ENST00000397411 FAM184BQ9ULE4 1060 aa29.3■■■□□ 2.28
TSPAN4-207ENST00000397411 V9GY48 417 aaPredicted RBP29.3■■■□□ 2.28
TSPAN4-207ENST00000397411 PDIA3P30101 505 aaKnown RBP29.29■■■□□ 2.28
TSPAN4-207ENST00000397411 CCT2P78371 535 aaKnown RBP29.29■■■□□ 2.28
TSPAN4-207ENST00000397411 SAMD3Q8N6K7 520 aa29.29■■■□□ 2.28
TSPAN4-207ENST00000397411 DNERQ8NFT8 737 aa29.29■■■□□ 2.28
TSPAN4-207ENST00000397411 SYTL5Q8TDW5 730 aaPredicted RBP29.29■■■□□ 2.28
TSPAN4-207ENST00000397411 SHISA4Q96DD7 197 aa29.29■■■□□ 2.28
TSPAN4-207ENST00000397411 GCOM1H8Y6P7 765 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 MYCNP04198 464 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 POLR2MP0CAP2 368 aa29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 ZNF865P0CJ78 1059 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 PDE4DQ08499 809 aa29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 ANKRD1Q15327 319 aa29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 LHX8Q68G74 356 aa29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 ZNF274Q96GC6 653 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 FAM217BQ9NTX9 383 aaPredicted RBP29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 MAP3K20Q9NYL2 800 aaKnown RBP29.28■■■□□ 2.28
TSPAN4-207ENST00000397411 LOC102724159A0A0B4J2E5 919 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 FARP2O94887 1054 aaPredicted RBP29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 RARBP10826 455 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 AKR1A1P14550 325 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 EVCP57679 992 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 AKAP17AQ02040 695 aaKnown RBP29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 PWP2Q15269 919 aaKnown RBP29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 EEPD1Q7L9B9 569 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 HEATR3Q7Z4Q2 680 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 CUL5Q93034 780 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 TAAR1Q96RJ0 339 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 C22orf23Q9BZE7 217 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 OGDHLQ9ULD0 1010 aa29.27■■■□□ 2.28
TSPAN4-207ENST00000397411 NEK4P51957 841 aa29.26■■■□□ 2.27
TSPAN4-207ENST00000397411 STK3Q13188 491 aa29.26■■■□□ 2.27
TSPAN4-207ENST00000397411 ARHGEF16Q5VV41 709 aa29.26■■■□□ 2.27
TSPAN4-207ENST00000397411 NOL8Q76FK4 1167 aaKnown RBP29.26■■■□□ 2.27
TSPAN4-207ENST00000397411 ANKLE1Q8NAG6 615 aa29.26■■■□□ 2.27
TSPAN4-207ENST00000397411 NSUN6Q8TEA1 469 aaKnown RBP29.26■■■□□ 2.27
TSPAN4-207ENST00000397411 RMDN3Q96TC7 470 aa29.26■■■□□ 2.27
TSPAN4-207ENST00000397411 CNTNAP5Q8WYK1 1306 aa29.25■■■□□ 2.27
TSPAN4-207ENST00000397411 HOXA13P31271 388 aaPredicted RBP29.25■■■□□ 2.27
TSPAN4-207ENST00000397411 HSD17B4P51659 736 aa29.25■■■□□ 2.27
TSPAN4-207ENST00000397411 ALDH8A1Q9H2A2 487 aaPredicted RBP29.25■■■□□ 2.27
TSPAN4-207ENST00000397411 CENPFP49454 3210 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 ASTN1O14525 1302 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 CPLX1O14810 134 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 OPLAHO14841 1288 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 CCDC144BQ3MJ40 725 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 FCHSD1Q86WN1 690 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 ARRDC4Q8NCT1 418 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 DDX49Q9Y6V7 483 aaKnown RBP29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 LCTP09848 1927 aa29.24■■■□□ 2.27
TSPAN4-207ENST00000397411 CPLX2Q6PUV4 134 aaKnown RBP29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 SMARCC2Q8TAQ2 1214 aa29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 GPKOWQ92917 476 aaPredicted RBP eCLIP29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 IL17RAQ96F46 866 aa29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 PSTPIP2Q9H939 334 aa29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 NCOA5Q9HCD5 579 aaKnown RBP29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 VTA1Q9NP79 307 aa29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 XPNPEP3Q9NQH7 507 aa29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 COL20A1Q9P218 1284 aa29.23■■■□□ 2.27
TSPAN4-207ENST00000397411 EIF2AK2P19525 551 aaKnown RBP29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 AK2P54819 239 aa29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 FUT2Q10981 343 aa29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 NECAB2Q7Z6G3 386 aa29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 FBXO16Q8IX29 292 aaPredicted RBP29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 MORC4Q8TE76 937 aa29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 IWS1Q96ST2 819 aa29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 SLKQ9H2G2 1235 aaPredicted RBP29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 RBM27Q9P2N5 1060 aaKnown RBP29.22■■■□□ 2.27
TSPAN4-207ENST00000397411 NAPAP54920 295 aa29.21■■■□□ 2.27
TSPAN4-207ENST00000397411 TNFAIP2Q03169 654 aa29.21■■■□□ 2.27
TSPAN4-207ENST00000397411 PAWRQ96IZ0 340 aaKnown RBP29.21■■■□□ 2.27
TSPAN4-207ENST00000397411 NID2Q14112 1375 aa29.21■■■□□ 2.27
TSPAN4-207ENST00000397411 PRPF3O43395 683 aaKnown RBP29.2■■■□□ 2.26
TSPAN4-207ENST00000397411 GHRHRQ02643 423 aa29.2■■■□□ 2.26
TSPAN4-207ENST00000397411 STXBP2Q15833 593 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms