RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 MAMDC4Q6UXC1 1216 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 RGS22Q8NE09 1264 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 TRPV1Q8NER1 839 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 TBC1D5Q92609 795 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 DEFB118Q96PH6 123 aa24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 UPF2Q9HAU5 1272 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-206ENST00000397408 PRAMEF19Q5SWL8 479 aa24.5■■□□□ 1.51
TSPAN4-206ENST00000397408 ARMCX2Q7L311 632 aa24.5■■□□□ 1.51
TSPAN4-206ENST00000397408 CFBP00751 764 aa24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 CNGA1P29973 690 aa24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 NEK4P51957 841 aa24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 AK2P54819 239 aa24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 CCT2P78371 535 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 U2AF1L4Q8WU68 220 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 ZNF274Q96GC6 653 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 MAF1Q9H063 256 aa24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 ALDH8A1Q9H2A2 487 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 NCOA5Q9HCD5 579 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 CNPY2Q9Y2B0 182 aa24.49■■□□□ 1.51
TSPAN4-206ENST00000397408 EN2P19622 333 aaPredicted RBP24.48■■□□□ 1.51
TSPAN4-206ENST00000397408 GJA8P48165 433 aa24.48■■□□□ 1.51
TSPAN4-206ENST00000397408 RBM25P49756 843 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-206ENST00000397408 ANKRD1Q15327 319 aa24.48■■□□□ 1.51
TSPAN4-206ENST00000397408 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.48■■□□□ 1.51
TSPAN4-206ENST00000397408 ADD3Q9UEY8 706 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-206ENST00000397408 NRBP1Q9UHY1 535 aa24.48■■□□□ 1.51
TSPAN4-206ENST00000397408 ASB14A6NK59 587 aa24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 SNAI1O95863 264 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 ALDH5A1P51649 535 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 STK3Q13188 491 aa24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 HEATR3Q7Z4Q2 680 aa24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 SYTL5Q8TDW5 730 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 SHISA4Q96DD7 197 aa24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 ZHX1Q9UKY1 873 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 DDX49Q9Y6V7 483 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 V9GY48 417 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-206ENST00000397408 SGPL1O95470 568 aa24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 HSD17B4P51659 736 aa24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 GHRHRQ02643 423 aa24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 NOL8Q76FK4 1167 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 GPKOWQ92917 476 aaPredicted RBP eCLIP24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 KIF2CQ99661 725 aa24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 COL20A1Q9P218 1284 aa24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 TPCN1Q9ULQ1 816 aa24.46■■□□□ 1.51
TSPAN4-206ENST00000397408 DDX20Q9UHI6 824 aaKnown RBP24.45■■□□□ 1.51
TSPAN4-206ENST00000397408 LRRC37A2A6NM11 1700 aa24.45■■□□□ 1.5
TSPAN4-206ENST00000397408 SEPT4O43236 478 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 ZNF865P0CJ78 1059 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 HOXA13P31271 388 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 WWC2Q6AWC2 1192 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 DNERQ8NFT8 737 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 PHKBQ93100 1093 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 ABHD16BQ9H3Z7 469 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 GCOM1H8Y6P7 765 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 MSCO60682 206 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 PPFIA3O75145 1194 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 POLR2MP0CAP2 368 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 ACVR2BQ13705 512 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 NTRK3Q16288 839 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 SAMD3Q8N6K7 520 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 TAAR1Q96RJ0 339 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 CRISPLD2Q9H0B8 497 aa24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 MAP3K20Q9NYL2 800 aaKnown RBP24.44■■□□□ 1.5
TSPAN4-206ENST00000397408 FRMPD3Q5JV73 1810 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 LOC102724159A0A0B4J2E5 919 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 CPLX1O14810 134 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 TFRCP02786 760 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 IFNAR1P17181 557 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 PWP2Q15269 919 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 ANO1Q5XXA6 986 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 LHX8Q68G74 356 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 MORC4Q8TE76 937 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 RMDN3Q96TC7 470 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 MPHOSPH6Q99547 160 aaKnown RBP24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 BACH2Q9BYV9 841 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 KATNBL1Q9H079 304 aa24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 SLKQ9H2G2 1235 aaPredicted RBP24.43■■□□□ 1.5
TSPAN4-206ENST00000397408 SCRN1Q12765 414 aa24.42■■□□□ 1.5
TSPAN4-206ENST00000397408 EEPD1Q7L9B9 569 aa24.42■■□□□ 1.5
TSPAN4-206ENST00000397408 FBXO16Q8IX29 292 aaPredicted RBP24.42■■□□□ 1.5
TSPAN4-206ENST00000397408 NSUN6Q8TEA1 469 aaKnown RBP24.42■■□□□ 1.5
TSPAN4-206ENST00000397408 TBC1D32Q96NH3 1257 aa24.42■■□□□ 1.5
TSPAN4-206ENST00000397408 SLC26A6Q9BXS9 759 aa24.42■■□□□ 1.5
TSPAN4-206ENST00000397408 RBM27Q9P2N5 1060 aaKnown RBP24.42■■□□□ 1.5
TSPAN4-206ENST00000397408 PRPF3O43395 683 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 AKR1A1P14550 325 aa24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 EDNRBP24530 442 aa24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 NAPAP54920 295 aa24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 AKAP17AQ02040 695 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 PFKFB3Q16875 520 aaPredicted RBP24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 ARHGEF16Q5VV41 709 aa24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 CPLX2Q6PUV4 134 aaKnown RBP24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 FCHSD1Q86WN1 690 aa24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 RNF26Q9BY78 433 aaPredicted RBP24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 OGDHLQ9ULD0 1010 aa24.41■■□□□ 1.5
TSPAN4-206ENST00000397408 B4DLN1 442 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 hCG_1984214I3L0E3 225 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 STXBP3O00186 592 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 PFKFB2O60825 505 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 LARGE1O95461 756 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms