RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CYP3A7P24462 503 aa21.63■■□□□ 1.05
TSPAN4-204ENST00000397404 HSD17B4P51659 736 aa21.63■■□□□ 1.05
TSPAN4-204ENST00000397404 CHST13Q8NET6 341 aa21.63■■□□□ 1.05
TSPAN4-204ENST00000397404 PGBD1Q96JS3 809 aa21.63■■□□□ 1.05
TSPAN4-204ENST00000397404 CYP3A4P08684 503 aa21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 SREBF1P36956 1147 aa21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 FAM160A1Q05DH4 1040 aa21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 PTGDRQ13258 359 aa21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 AXDND1Q5T1B0 1012 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 ZNF526Q8TF50 670 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 CCDC34Q96HJ3 373 aa21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 ZCCHC17Q9NP64 241 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 FAM13BQ9NYF5 915 aa21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 ZNF214Q9UL59 606 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-204ENST00000397404 NEMFO60524 1076 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 CCNT1O60563 726 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 LONP1P36776 959 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 LETM2Q2VYF4 491 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 USP17L6PQ6QN14 398 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 CNKSR2Q8WXI2 1034 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 HHIPL1Q96JK4 782 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 AK8Q96MA6 479 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 RAB34Q9BZG1 259 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 PASKQ96RG2 1323 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 A0A0G2JMZ2 1700 aa21.61■■□□□ 1.05
TSPAN4-204ENST00000397404 FAM205CA6NFA0 338 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 OPLAHO14841 1288 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 SLC25A27O95847 323 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 CFBP00751 764 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 ATP2B1P20020 1258 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 CIITAP33076 1130 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 MCM7P33993 719 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 STAT3P40763 770 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 SNAP25P60880 206 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 ZNF174Q15697 407 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 UBE2SQ16763 222 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 TREML2Q5T2D2 321 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 CCDC183Q5T5S1 534 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 SPRYD7Q5W111 196 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 XRRA1Q6P2D8 792 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.6■■□□□ 1.055e-6■■■■■ 45.5
TSPAN4-204ENST00000397404 RBBP6Q7Z6E9 1792 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 ANKRD23Q86SG2 305 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 CCAR1Q8IX12 1150 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 CRYGNQ8WXF5 182 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 AGBL1Q96MI9 1066 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 TRERF1Q96PN7 1200 aa21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 RAVER2Q9HCJ3 691 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 FBXO2Q9UK22 296 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-204ENST00000397404 TBX3O15119 743 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 CTAGE5O15320 804 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 ALAS1P13196 640 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 INHBEP58166 350 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 DGKZQ13574 1117 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 CST9Q5W186 159 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 RESP18Q5W5W9 173 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 SNRNP48Q6IEG0 339 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 SAMD1Q6SPF0 538 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 DTHD1Q6ZMT9 781 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 CPXCR1Q8N123 301 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 MBOAT7Q96N66 472 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 ASCC2Q9H1I8 757 aaPredicted RBP21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 ACAD9Q9H845 621 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 STK24Q9Y6E0 443 aa21.59■■□□□ 1.05
TSPAN4-204ENST00000397404 MARCKSP29966 332 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 HUNKP57058 714 aa21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 HERVK_113P62684 666 aa21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 MOGSQ13724 837 aa21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 TMEM132BQ14DG7 1078 aa21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 ELOA2Q8IYF1 753 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 CLEC4DQ8WXI8 215 aa21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 TIGD1Q96MW7 591 aa21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 TMEM260Q9NX78 707 aa21.58■■□□□ 1.05
TSPAN4-204ENST00000397404 SLC26A4O43511 780 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 KINO60870 393 aaKnown RBP21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 OR52Z1P0C646 297 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 TXLNAP40222 546 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 ARHGAP4P98171 946 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 Q4G0T1 1027 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 CAVIN1Q6NZI2 390 aaKnown RBP21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 RIOX2Q8IUF8 465 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 SLFN12Q8IYM2 578 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 C4orf32Q8N8J7 132 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 FSIP1Q8NA03 581 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 MS4A4AQ96JQ5 239 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 RNF146Q9NTX7 359 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 USP25Q9UHP3 1055 aa21.58■■□□□ 1.04
TSPAN4-204ENST00000397404 PFASO15067 1338 aa21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 TESPA1A2RU30 521 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 MANSC4A6NHS7 340 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 TOMM70O94826 608 aa21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 GJA5P36382 358 aa21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 GCLCP48506 637 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 FSTL1Q12841 308 aa21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 TMEM266Q2M3C6 531 aa21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 NOM1Q5C9Z4 860 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 GPAT2Q6NUI2 795 aa21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 DDX25Q9UHL0 483 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 HOOK1Q9UJC3 728 aaKnown RBP21.57■■□□□ 1.04
TSPAN4-204ENST00000397404 FRMPD4Q14CM0 1322 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms