RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 GCNT3O95395 438 aa16.98■□□□□ 0.31
MCF2L-205ENST00000397017 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
MCF2L-205ENST00000397017 KRT9P35527 623 aa16.98■□□□□ 0.31
MCF2L-205ENST00000397017 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
MCF2L-205ENST00000397017 HAUS3Q68CZ6 603 aa16.98■□□□□ 0.31
MCF2L-205ENST00000397017 LARP4BQ92615 738 aaKnown RBP16.98■□□□□ 0.31
MCF2L-205ENST00000397017 TIGD1Q96MW7 591 aa16.98■□□□□ 0.31
MCF2L-205ENST00000397017 CSADQ9Y600 493 aa16.98■□□□□ 0.31
MCF2L-205ENST00000397017 AP5Z1O43299 807 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 FGFR1OPO95684 399 aaKnown RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 SPA17Q15506 151 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 TEX35Q5T0J7 233 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 CNNM4Q6P4Q7 775 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 NLRC4Q9NPP4 1024 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 SERPINA10Q9UK55 444 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 GOLGB1Q14789 3259 aaKnown RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 PALM3A6NDB9 673 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 CCDC169A6NNP5 214 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 E9PMD0 336 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 ATP2C1P98194 919 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 CTTNQ14247 550 aaKnown RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 CT47A1Q5JQC4 288 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 LRRC27Q9C0I9 530 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 MYOZ2Q9NPC6 264 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 PCDHB13Q9Y5F0 798 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 CCP110O43303 1012 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 LRCH2Q5VUJ6 765 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 DCAF15Q66K64 600 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 DPF2Q92785 391 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 MAP3K14Q99558 947 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 MRPL44Q9H9J2 332 aaKnown RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 GUCA1BQ9UMX6 200 aa16.97■□□□□ 0.31
MCF2L-205ENST00000397017 LUC7L2Q9Y383 392 aaKnown RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 MRPL11Q9Y3B7 192 aaKnown RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 COL1A1P02452 1464 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-205ENST00000397017 ARHGEF35A5YM69 484 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 KCNJ18B7U540 433 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 AKR1B15C9JRZ8 316 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-205ENST00000397017 KIF5CO60282 957 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 KCNJ12Q14500 433 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 KMT5BQ4FZB7 885 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 LRRC8AQ8IWT6 810 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 CDAN1Q8IWY9 1227 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 SPZ1Q9BXG8 430 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 POTEB3A0JP26 581 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 POTECB2RU33 542 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-205ENST00000397017 ARHGEF16Q5VV41 709 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 POTEBQ6S5H4 581 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 FAM114A1Q8IWE2 563 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 KIF20AO95235 890 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 ARHGAP4P98171 946 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 DPY19L2Q6NUT2 758 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 ZKSCAN4Q969J2 545 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-205ENST00000397017 GSDMAQ96QA5 445 aa16.96■□□□□ 0.31
MCF2L-205ENST00000397017 BICDL2A1A5D9 508 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 HMGCS2P54868 508 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 DHX40Q8IX18 779 aaKnown RBP16.95■□□□□ 0.3
MCF2L-205ENST00000397017 DEFB129Q9H1M3 183 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 FMR1Q06787 632 aaKnown RBP eCLIP16.95■□□□□ 0.3
MCF2L-205ENST00000397017 MTMR2Q13614 643 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 SPECC1LQ69YQ0 1117 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 ANKRD35Q8N283 1001 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 GLT8D2Q9H1C3 349 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 CASQ1P31415 396 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 SYCP1Q15431 976 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 SPATA1Q5VX52 437 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 TCHPQ9BT92 498 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 GINS2Q9Y248 185 aa16.95■□□□□ 0.3
MCF2L-205ENST00000397017 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 RAPGEF1Q13905 1077 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 POTEEQ6S8J3 1075 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 PANK4Q9NVE7 773 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 PRR12Q9ULL5 1215 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 TCHHQ07283 1943 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 MYO3BQ8WXR4 1341 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 INPP5BP32019 993 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 IQCB1Q15051 598 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-205ENST00000397017 UBXN4Q92575 508 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 BHMT2Q9H2M3 363 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 GGA3Q9NZ52 723 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 FCER1AP12319 257 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 FBXL16Q8N461 479 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 MRFAP1L1Q96HT8 127 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 ZNF577Q9BSK1 485 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 SH3GLB2Q9NR46 395 aa16.94■□□□□ 0.3
MCF2L-205ENST00000397017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.94■□□□□ 0.37e-7■□□□□ 11.2
MCF2L-205ENST00000397017 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms