RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 GALNT17Q6IS24 598 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 GLG1Q92896 1179 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 ATP8A1Q9Y2Q0 1164 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 HNRNPCL2B2RXH8 293 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 HNRNPCL1O60812 293 aaKnown RBP15.19■□□□□ 0.02
COL4A3-202ENST00000396578 BABAM1Q9NWV8 329 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 RFX1P22670 979 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 NDUFA8P51970 172 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 MYL7Q01449 175 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 ZBBXA8MT70 800 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 ADAM9Q13443 819 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 AOC3Q16853 763 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
COL4A3-202ENST00000396578 ZNF594Q96JF6 807 aaPredicted RBP15.19■□□□□ 0.02
COL4A3-202ENST00000396578 OR52Z1P0C646 297 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 KPNA2P52292 529 aaKnown RBP15.19■□□□□ 0.02
COL4A3-202ENST00000396578 COL4A3BPQ9Y5P4 624 aa15.19■□□□□ 0.02
COL4A3-202ENST00000396578 MYO1FO00160 1098 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 MCF2LO15068 1137 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 RFX6Q8HWS3 928 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 MAN1A2O60476 641 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 BPIFB4P59827 614 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 PTK2Q05397 1052 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 ATG16L1Q676U5 607 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 ADPGKQ9BRR6 497 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 PSTPIP2Q9H939 334 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 SH3TC1Q8TE82 1336 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 DENND4BO75064 1496 aaPredicted RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 LMNAP02545 664 aaKnown RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 GUCY2CP25092 1073 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 MESDQ14696 234 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 ZC3H15Q8WU90 426 aaKnown RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 TGFBRAP1Q8WUH2 860 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 TFAP4Q01664 338 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 SLC35F6Q8N357 371 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 ATP6V1E2Q96A05 226 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 TSC22D3Q99576 134 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 GNPATO15228 680 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 SGO2Q562F6 1265 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 DISC1Q9NRI5 854 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 FGFR1OP2Q9NVK5 253 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 TPCN1Q9ULQ1 816 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 TSTA3Q13630 321 aaPredicted RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 LONP1P36776 959 aaKnown RBP15.18■□□□□ 0.02
COL4A3-202ENST00000396578 ALS2CLQ60I27 953 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 ARMCX5Q6P1M9 558 aa15.18■□□□□ 0.02
COL4A3-202ENST00000396578 NSMFQ6X4W1 530 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 KIFC3Q9BVG8 833 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 YY1AP1Q9H869 796 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 AK9Q5TCS8 1911 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 PPARAQ07869 468 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 SLC12A1Q13621 1099 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 HINFPQ9BQA5 517 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TRAIPQ9BWF2 469 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 SLC39A2Q9NP94 309 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TCP10Q12799 353 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TAB3Q8N5C8 712 aaPredicted RBP15.17■□□□□ 0.02
COL4A3-202ENST00000396578 MCUQ8NE86 351 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TEKT2Q9UIF3 430 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 INTUQ9ULD6 942 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TNRQ92752 1358 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 MED23Q9ULK4 1368 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 MAPK13O15264 365 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 ZNF790Q6PG37 636 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 SLC17A8Q8NDX2 589 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TMEM191BP0C7N4 346 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 GRAMD4Q6IC98 578 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 FBXL13Q8NEE6 735 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 PCDHB4Q9Y5E5 795 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TESPA1A2RU30 521 aaPredicted RBP15.17■□□□□ 0.02
COL4A3-202ENST00000396578 PGRMC1O00264 195 aaKnown RBP15.17■□□□□ 0.02
COL4A3-202ENST00000396578 SEPT2Q15019 361 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 NEK8Q86SG6 692 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 TTC1Q99614 292 aa15.17■□□□□ 0.02
COL4A3-202ENST00000396578 UPF3AQ9H1J1 476 aaKnown RBP15.17■□□□□ 0.02
COL4A3-202ENST00000396578 MFAP3P55082 362 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 TRMT10CQ7L0Y3 403 aaKnown RBP15.16■□□□□ 0.02
COL4A3-202ENST00000396578 EXOC4Q96A65 974 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 TUBGCP2Q9BSJ2 902 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 ENC1O14682 589 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 C16orf87Q6PH81 154 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 PBKQ96KB5 322 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 SPC25Q9HBM1 224 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 SEC31AO94979 1220 aaKnown RBP15.16■□□□□ 0.02
COL4A3-202ENST00000396578 HEXIM1O94992 359 aaKnown RBP15.16■□□□□ 0.02
COL4A3-202ENST00000396578 C2orf54Q08AI8 447 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 KRT26Q7Z3Y9 468 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 MCF2P10911 925 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 MAPK4P31152 587 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 SYMPKQ92797 1274 aaKnown RBP15.16■□□□□ 0.02
COL4A3-202ENST00000396578 GPT2Q8TD30 523 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 TAF5LO75529 589 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms