RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SKAP1Q86WV1 359 aa21.41■■□□□ 1.02
FXN-203ENST00000396366 STAG2Q8N3U4 1231 aa21.41■■□□□ 1.02
FXN-203ENST00000396366 ADD3Q9UEY8 706 aaKnown RBP21.41■■□□□ 1.02
FXN-203ENST00000396366 ELP1O95163 1332 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 PARP1P09874 1014 aaKnown RBP21.4■■□□□ 1.02
FXN-203ENST00000396366 CDK7P50613 346 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 EPHB4P54760 987 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 ASPRV1Q53RT3 343 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 IFIT1BQ5T764 474 aaKnown RBP21.4■■□□□ 1.02
FXN-203ENST00000396366 CXCL17Q6UXB2 119 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 TOX2Q96NM4 488 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 JMJD4Q9H9V9 463 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 SENP2Q9HC62 589 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 VTA1Q9NP79 307 aa21.4■■□□□ 1.02
FXN-203ENST00000396366 DCDC2CA8MYV0 355 aa21.39■■□□□ 1.01
FXN-203ENST00000396366 FSCN1Q16658 493 aaKnown RBP21.39■■□□□ 1.01
FXN-203ENST00000396366 QRICH1Q2TAL8 776 aa21.39■■□□□ 1.01
FXN-203ENST00000396366 STOX1Q6ZVD7 989 aa21.39■■□□□ 1.01
FXN-203ENST00000396366 CHST3Q7LGC8 479 aa21.39■■□□□ 1.01
FXN-203ENST00000396366 AP5M1Q9H0R1 490 aa21.39■■□□□ 1.01
FXN-203ENST00000396366 U3KPZ7 1027 aaPredicted RBP21.39■■□□□ 1.01
FXN-203ENST00000396366 DHX16O60231 1041 aaKnown RBP21.38■■□□□ 1.01
FXN-203ENST00000396366 RAG1P15918 1043 aa21.38■■□□□ 1.01
FXN-203ENST00000396366 DEFB123Q8N688 67 aa21.38■■□□□ 1.01
FXN-203ENST00000396366 PNMA2Q9UL42 364 aa21.38■■□□□ 1.01
FXN-203ENST00000396366 A0A0U1RQG5 324 aaPredicted RBP21.37■■□□□ 1.01
FXN-203ENST00000396366 E7EWF7 191 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 ARVCFO00192 962 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 TRDNQ13061 729 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 GPR153Q6NV75 609 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 MAP4K1Q92918 833 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 WDR11Q9BZH6 1224 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 COL20A1Q9P218 1284 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 MYH6P13533 1939 aa21.37■■□□□ 1.01
FXN-203ENST00000396366 GRIN2DO15399 1336 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 RBM47A0AV96 593 aaKnown RBP21.36■■□□□ 1.01
FXN-203ENST00000396366 PSMC6P62333 389 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 PDE4DQ08499 809 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 DUSP28Q4G0W2 176 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 RGS22Q8NE09 1264 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 TAAR1Q96RJ0 339 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 MAD2L2Q9UI95 211 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 TBX21Q9UL17 535 aa21.36■■□□□ 1.01
FXN-203ENST00000396366 ABCB11O95342 1321 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 COL6A3P12111 3177 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 KLRF2D3W0D1 207 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 IFIT3O14879 490 aaKnown RBP21.35■■□□□ 1.01
FXN-203ENST00000396366 EDNRBP24530 442 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 SLC35G1Q2M3R5 365 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 FBXO11Q86XK2 927 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 FAM126BQ8IXS8 530 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 Q9Y3F1 56 aa21.35■■□□□ 1.01
FXN-203ENST00000396366 LOC102724159A0A0B4J2E5 919 aa21.34■■□□□ 1.01
FXN-203ENST00000396366 PALM3A6NDB9 673 aaPredicted RBP21.34■■□□□ 1.01
FXN-203ENST00000396366 PPP1R11O60927 126 aaPredicted RBP21.34■■□□□ 1.01
FXN-203ENST00000396366 TIMP1P01033 207 aa21.34■■□□□ 1.01
FXN-203ENST00000396366 PWP2Q15269 919 aaKnown RBP21.34■■□□□ 1.01
FXN-203ENST00000396366 SLC43A3Q8NBI5 491 aa21.34■■□□□ 1.01
FXN-203ENST00000396366 DNERQ8NFT8 737 aa21.34■■□□□ 1.01
FXN-203ENST00000396366 SYTL5Q8TDW5 730 aaPredicted RBP21.34■■□□□ 1.01
FXN-203ENST00000396366 COPS5Q92905 334 aa21.34■■□□□ 1.01
FXN-203ENST00000396366 RBM8AQ9Y5S9 174 aaKnown RBP21.34■■□□□ 1.01
FXN-203ENST00000396366 MROH7Q68CQ1 1323 aa21.33■■□□□ 1.01
FXN-203ENST00000396366 CD4P01730 458 aa21.33■■□□□ 1.01
FXN-203ENST00000396366 ANTXR2P58335 489 aa21.33■■□□□ 1.01
FXN-203ENST00000396366 FPGSQ05932 587 aa21.33■■□□□ 1.01
FXN-203ENST00000396366 ITGA7Q13683 1181 aa21.33■■□□□ 1.01
FXN-203ENST00000396366 COL9A3Q14050 684 aaPredicted RBP21.33■■□□□ 1.01
FXN-203ENST00000396366 RALYLQ86SE5 291 aaKnown RBP21.33■■□□□ 1.01
FXN-203ENST00000396366 NCOA7Q8NI08 942 aa21.33■■□□□ 1.01
FXN-203ENST00000396366 MTMR10Q9NXD2 777 aa21.33■■□□□ 1.01
FXN-203ENST00000396366 BAZ2BQ9UIF8 2168 aaKnown RBP21.32■■□□□ 1
FXN-203ENST00000396366 OPLAHO14841 1288 aa21.32■■□□□ 1
FXN-203ENST00000396366 GRM4Q14833 912 aa21.32■■□□□ 1
FXN-203ENST00000396366 MTMR8Q96EF0 704 aa21.32■■□□□ 1
FXN-203ENST00000396366 PPP1R12CQ9BZL4 782 aa21.32■■□□□ 1
FXN-203ENST00000396366 TRPV6Q9H1D0 765 aa21.32■■□□□ 1
FXN-203ENST00000396366 GPHNQ9NQX3 736 aaPredicted RBP21.32■■□□□ 1
FXN-203ENST00000396366 MRPL11Q9Y3B7 192 aaKnown RBP21.32■■□□□ 1
FXN-203ENST00000396366 ZEB2O60315 1214 aa21.31■■□□□ 1
FXN-203ENST00000396366 CABYRO75952 493 aa21.31■■□□□ 1
FXN-203ENST00000396366 ARIH2O95376 493 aa21.31■■□□□ 1
FXN-203ENST00000396366 WTAPQ15007 396 aa21.31■■□□□ 1
FXN-203ENST00000396366 C16orf59Q7L2K0 433 aa21.31■■□□□ 1
FXN-203ENST00000396366 MCF2L2Q86YR7 1114 aa21.31■■□□□ 1
FXN-203ENST00000396366 MB21D2Q8IYB1 491 aaPredicted RBP21.31■■□□□ 1
FXN-203ENST00000396366 OR6J1Q8NGC5 347 aa21.31■■□□□ 1
FXN-203ENST00000396366 IGDCC4Q8TDY8 1250 aa21.31■■□□□ 1
FXN-203ENST00000396366 PPP1R13LQ8WUF5 828 aa21.31■■□□□ 1
FXN-203ENST00000396366 FAM161BQ96MY7 647 aa21.31■■□□□ 1
FXN-203ENST00000396366 AMNQ9BXJ7 453 aa21.31■■□□□ 1
FXN-203ENST00000396366 LSG1Q9H089 658 aaKnown RBP21.31■■□□□ 1
FXN-203ENST00000396366 ERICH2A1L162 156 aa21.3■■□□□ 1
FXN-203ENST00000396366 TLR3O15455 904 aaKnown RBP21.3■■□□□ 1
FXN-203ENST00000396366 CFBP00751 764 aa21.3■■□□□ 1
FXN-203ENST00000396366 MYL3P08590 195 aa21.3■■□□□ 1
FXN-203ENST00000396366 TXNP10599 105 aaKnown RBP21.3■■□□□ 1
FXN-203ENST00000396366 CYP2C18P33260 490 aa21.3■■□□□ 1
FXN-203ENST00000396366 TROAPQ12815 778 aa21.3■■□□□ 1
FXN-203ENST00000396366 TMEM67Q5HYA8 995 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms