RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 ME3Q16798 604 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 AIFM3Q96NN9 605 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 COL20A1Q9P218 1284 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 FBXO40Q9UH90 709 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 ZHX1Q9UKY1 873 aaPredicted RBP11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 CNTNAP5Q8WYK1 1306 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 CCL5P13501 91 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 GNAQP50148 359 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 IRF5Q13568 498 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 GJB4Q9NTQ9 266 aa11.67□□□□□ -0.54
THUMPD1-202ENST00000396083 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 EN2P19622 333 aaPredicted RBP11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 PGBD1Q96JS3 809 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 XRCC5P13010 732 aaKnown RBP11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 PRMT2P55345 433 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 FUT2Q10981 343 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 UBE2SQ16763 222 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 ZNF792Q3KQV3 632 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 WWC2Q6AWC2 1192 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 PXYLP1Q8TE99 480 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 MTMR8Q96EF0 704 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 FGD4Q96M96 766 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 TINF2Q9BSI4 451 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 RBM28Q9NW13 759 aaKnown RBP11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 SLC5A4Q9NY91 659 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 PCDH10Q9P2E7 1040 aa11.66□□□□□ -0.54
THUMPD1-202ENST00000396083 SORBS3O60504 671 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 NAPAP54920 295 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 AKAP17AQ02040 695 aaKnown RBP11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 TMEM63BQ5T3F8 832 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 MFSD14CQ5VZR4 134 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 ARMCX2Q7L311 632 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 FBXO16Q8IX29 292 aaPredicted RBP11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 TRPV1Q8NER1 839 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 MRPL11Q9Y3B7 192 aaKnown RBP11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 DNAJC25-GNG10A0A024R161 153 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 CCDC196A0A1B0GTZ2 297 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 NTRK3Q16288 839 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 CCDC83Q8IWF9 413 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 ABRAQ8N0Z2 381 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 FAM133AQ8N9E0 248 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 MAP3K14Q99558 947 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 VPS54Q9P1Q0 977 aa11.65□□□□□ -0.54
THUMPD1-202ENST00000396083 ADAMTS3O15072 1205 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 ABCB11O95342 1321 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 HOXC6P09630 235 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 COPB2P35606 906 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 UIMC1Q96RL1 719 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 RMDN3Q96TC7 470 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 PDGFCQ9NRA1 345 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 PFASO15067 1338 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 JAK2O60674 1132 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 MYCLP12524 364 aaPredicted RBP11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 SYTL5Q8TDW5 730 aaPredicted RBP11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 ARMC5Q96C12 935 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 ZNF274Q96GC6 653 aaPredicted RBP11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 LCTP09848 1927 aa11.64□□□□□ -0.55
THUMPD1-202ENST00000396083 TKFCQ3LXA3 575 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 SMARCC2Q8TAQ2 1214 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 RASGRP4Q8TDF6 673 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 U2AF1L4Q8WU68 220 aaKnown RBP11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 PSTPIP2Q9H939 334 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 SZT2Q5T011 3432 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 RPTORQ8N122 1335 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 ALDH5A1P51649 535 aaPredicted RBP11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 EVCP57679 992 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 ARHGEF16Q5VV41 709 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 FBXL16Q8N461 479 aa11.63□□□□□ -0.55
THUMPD1-202ENST00000396083 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 GCOM1H8Y6P7 765 aaPredicted RBP11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 PGK1P00558 417 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 TFRCP02786 760 aaKnown RBP11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 POLR2MP0CAP2 368 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 SCG2P13521 617 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 ADCYAP1R1P41586 468 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 PKN1Q16512 942 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 IL31RAQ8NI17 732 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 TMEM260Q9NX78 707 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 RTEL1Q9NZ71 1219 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 SMCO2A6NFE2 343 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 ADCY6O43306 1168 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 CTDNEP1O95476 244 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 IFNAR1P17181 557 aa11.62□□□□□ -0.55
THUMPD1-202ENST00000396083 SSRP1Q08945 709 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms