RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ZNF214Q9UL59 606 aaPredicted RBP15.59■□□□□ 0.09
VAPB-202ENST00000395802 ATP2B1P20020 1258 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 ME1P48163 572 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 TOB1P50616 345 aaPredicted RBP15.59■□□□□ 0.09
VAPB-202ENST00000395802 USP11P51784 963 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 GHRHRQ02643 423 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 PLS1Q14651 629 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 TMEM132BQ14DG7 1078 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 INF2Q27J81 1249 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 USP17L6PQ6QN14 398 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 CHST13Q8NET6 341 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 TBCKQ8TEA7 893 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 SMCR8Q8TEV9 937 aaPredicted RBP15.59■□□□□ 0.09
VAPB-202ENST00000395802 P2RX7Q99572 595 aaKnown RBP15.59■□□□□ 0.09
VAPB-202ENST00000395802 CLIC4Q9Y696 253 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 DDX49Q9Y6V7 483 aaKnown RBP15.59■□□□□ 0.09
VAPB-202ENST00000395802 PARP14Q460N5 1801 aa15.58■□□□□ 0.09
VAPB-202ENST00000395802 PDHXO00330 501 aa15.58■□□□□ 0.08
VAPB-202ENST00000395802 SLC25A27O95847 323 aa15.58■□□□□ 0.08
VAPB-202ENST00000395802 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
VAPB-202ENST00000395802 UBE2SQ16763 222 aa15.58■□□□□ 0.08
VAPB-202ENST00000395802 EARS2Q5JPH6 523 aaKnown RBP15.58■□□□□ 0.08
VAPB-202ENST00000395802 GPAT2Q6NUI2 795 aa15.58■□□□□ 0.08
VAPB-202ENST00000395802 RASAL3Q86YV0 1011 aa15.58■□□□□ 0.08
VAPB-202ENST00000395802 PARK7Q99497 189 aaKnown RBP15.58■□□□□ 0.08
VAPB-202ENST00000395802 ACAD9Q9H845 621 aa15.58■□□□□ 0.08
VAPB-202ENST00000395802 TESPA1A2RU30 521 aaPredicted RBP15.57■□□□□ 0.08
VAPB-202ENST00000395802 GCLCP48506 637 aaPredicted RBP15.57■□□□□ 0.08
VAPB-202ENST00000395802 SREBF2Q12772 1141 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 ADALQ6DHV7 355 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 ZNF784Q8NCA9 323 aaPredicted RBP15.57■□□□□ 0.08
VAPB-202ENST00000395802 GPT2Q8TD30 523 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 FERMT2Q96AC1 680 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 ANO3Q9BYT9 981 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 RNF146Q9NTX7 359 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 PCDHB6Q9Y5E3 794 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 RLFQ13129 1914 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 OPLAHO14841 1288 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 CCNT1O60563 726 aaKnown RBP15.57■□□□□ 0.08
VAPB-202ENST00000395802 SLC10A3P09131 477 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 HSD17B4P51659 736 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 CCNA1P78396 465 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
VAPB-202ENST00000395802 LETM2Q2VYF4 491 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 ARL6IP4Q66PJ3 421 aaKnown RBP15.57■□□□□ 0.08
VAPB-202ENST00000395802 PPP4R3AQ6IN85 833 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 MOXD1Q6UVY6 613 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 RNF207Q6ZRF8 634 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 RIOX2Q8IUF8 465 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 BRI3BPQ8WY22 251 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 HOMER2Q9NSB8 354 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 TMEM260Q9NX78 707 aa15.57■□□□□ 0.08
VAPB-202ENST00000395802 BTBD19C9JJ37 291 aa15.56■□□□□ 0.08
VAPB-202ENST00000395802 GSE1Q14687 1217 aa15.56■□□□□ 0.08
VAPB-202ENST00000395802 PTPAQ15257 358 aa15.56■□□□□ 0.08
VAPB-202ENST00000395802 KRI1Q8N9T8 703 aaKnown RBP15.56■□□□□ 0.08
VAPB-202ENST00000395802 CLEC4DQ8WXI8 215 aa15.56■□□□□ 0.08
VAPB-202ENST00000395802 FTOQ9C0B1 505 aaKnown RBP eCLIP15.56■□□□□ 0.08
VAPB-202ENST00000395802 SPATC1LQ9H0A9 340 aa15.56■□□□□ 0.08
VAPB-202ENST00000395802 FAM205CA6NFA0 338 aa15.55■□□□□ 0.08
VAPB-202ENST00000395802 HOXA13P31271 388 aaPredicted RBP15.55■□□□□ 0.08
VAPB-202ENST00000395802 MCM7P33993 719 aa15.55■□□□□ 0.08
VAPB-202ENST00000395802 SREBF1P36956 1147 aa15.55■□□□□ 0.08
VAPB-202ENST00000395802 ZNF174Q15697 407 aa15.55■□□□□ 0.08
VAPB-202ENST00000395802 FCHSD1Q86WN1 690 aa15.55■□□□□ 0.08
VAPB-202ENST00000395802 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
VAPB-202ENST00000395802 PFASO15067 1338 aa15.55■□□□□ 0.08
VAPB-202ENST00000395802 A0A1W2PQ27 194 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 A0A1W2PQ64 194 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 A0A1W2PQD8 194 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 NEMFO60524 1076 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 GADD45BO75293 160 aaPredicted RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 ATP2C1P98194 919 aaPredicted RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 PTGDRQ13258 359 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 SYAP1Q96A49 352 aaPredicted RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 PAGR1Q9BTK6 254 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 MROH8Q9H579 483 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 NFIBO00712 420 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 ADAMTS3O15072 1205 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 CUTAO60888 179 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 CYP3A4P08684 503 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 PRPHP41219 470 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 RPS6P62753 249 aaKnown RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 ARHGAP4P98171 946 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 NOM1Q5C9Z4 860 aaKnown RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 NSMFQ6X4W1 530 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 ZNF579Q8NAF0 562 aaKnown RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 SHCBP1Q8NEM2 672 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 GPRC5AQ8NFJ5 357 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 GZF1Q9H116 711 aaPredicted RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 CREBZFQ9NS37 354 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 PCDHA7Q9UN72 937 aa15.54■□□□□ 0.08
VAPB-202ENST00000395802 SRPRBQ9Y5M8 271 aaKnown RBP15.54■□□□□ 0.08
VAPB-202ENST00000395802 PTPREP23469 700 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 MARCKSP29966 332 aaPredicted RBP15.53■□□□□ 0.08
VAPB-202ENST00000395802 ZNF76P36508 570 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 MUM1L1Q5H9M0 696 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 NCAPG2Q86XI2 1143 aa15.53■□□□□ 0.08
VAPB-202ENST00000395802 CCAR1Q8IX12 1150 aaKnown RBP15.53■□□□□ 0.08
VAPB-202ENST00000395802 ANKRD35Q8N283 1001 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms