RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 FBXO2Q9UK22 296 aaPredicted RBP21.99■■□□□ 1.11
LMNB1-202ENST00000395354 SLC45A1Q9Y2W3 748 aa21.99■■□□□ 1.11
LMNB1-202ENST00000395354 BAZ2BQ9UIF8 2168 aaKnown RBP21.99■■□□□ 1.11
LMNB1-202ENST00000395354 ESYT2A0FGR8 921 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 IGF2BP3O00425 579 aaKnown RBP eCLIP21.98■■□□□ 1.11
LMNB1-202ENST00000395354 CAVIN2O95810 425 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 MAP2K2P36507 400 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 IRX3P78415 501 aaPredicted RBP21.98■■□□□ 1.11
LMNB1-202ENST00000395354 CCDC173Q0VFZ6 552 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 EARS2Q5JPH6 523 aaKnown RBP21.98■■□□□ 1.11
LMNB1-202ENST00000395354 SHC4Q6S5L8 630 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 IFNL1Q8IU54 200 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 CKAP2LQ8IYA6 745 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 REM2Q8IYK8 340 aaPredicted RBP21.98■■□□□ 1.11
LMNB1-202ENST00000395354 ASCC2Q9H1I8 757 aaPredicted RBP21.98■■□□□ 1.11
LMNB1-202ENST00000395354 VAT1LQ9HCJ6 419 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 PRR12Q9ULL5 1215 aa21.98■■□□□ 1.11
LMNB1-202ENST00000395354 ZNF202O95125 648 aa21.97■■□□□ 1.11
LMNB1-202ENST00000395354 GNA11P29992 359 aa21.97■■□□□ 1.11
LMNB1-202ENST00000395354 TTC38Q5R3I4 469 aa21.97■■□□□ 1.11
LMNB1-202ENST00000395354 SYDE2Q5VT97 1194 aa21.97■■□□□ 1.11
LMNB1-202ENST00000395354 TYW1BQ6NUM6 668 aa21.97■■□□□ 1.11
LMNB1-202ENST00000395354 ADGRF4Q8IZF3 695 aa21.97■■□□□ 1.11
LMNB1-202ENST00000395354 P2RX7Q99572 595 aaKnown RBP21.97■■□□□ 1.11
LMNB1-202ENST00000395354 PPP1R9AQ9ULJ8 1098 aa21.97■■□□□ 1.11
LMNB1-202ENST00000395354 FAM205CA6NFA0 338 aa21.96■■□□□ 1.11
LMNB1-202ENST00000395354 DSG3P32926 999 aa21.96■■□□□ 1.11
LMNB1-202ENST00000395354 FERMT2Q96AC1 680 aa21.96■■□□□ 1.11
LMNB1-202ENST00000395354 PIGSQ96S52 555 aa21.96■■□□□ 1.11
LMNB1-202ENST00000395354 PPP1R9BQ96SB3 815 aa21.96■■□□□ 1.11
LMNB1-202ENST00000395354 C6orf50Q9HD87 102 aa21.96■■□□□ 1.11
LMNB1-202ENST00000395354 PNMA3Q9UL41 463 aa21.96■■□□□ 1.11
LMNB1-202ENST00000395354 SYKP43405 635 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 NAPAP54920 295 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 PPP1R18Q6NYC8 613 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 PIK3AP1Q6ZUJ8 805 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 ELOA2Q8IYF1 753 aaPredicted RBP21.95■■□□□ 1.11
LMNB1-202ENST00000395354 RNF214Q8ND24 703 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 SDF4Q9BRK5 362 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 JMJD4Q9H9V9 463 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 ZCCHC17Q9NP64 241 aaKnown RBP21.95■■□□□ 1.11
LMNB1-202ENST00000395354 FAM13BQ9NYF5 915 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 MRVI1Q9Y6F6 885 aa21.95■■□□□ 1.11
LMNB1-202ENST00000395354 PNMA6FA0A0J9YX94 578 aa21.95■■□□□ 1.1
LMNB1-202ENST00000395354 CYP2C8P10632 490 aa21.95■■□□□ 1.1
LMNB1-202ENST00000395354 ATG4CQ96DT6 458 aa21.95■■□□□ 1.1
LMNB1-202ENST00000395354 MTMR8Q96EF0 704 aa21.95■■□□□ 1.1
LMNB1-202ENST00000395354 PCDHA6Q9UN73 950 aa21.95■■□□□ 1.1
LMNB1-202ENST00000395354 PCDHA8Q9Y5H6 950 aa21.95■■□□□ 1.1
LMNB1-202ENST00000395354 MYPNQ86TC9 1320 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 CCDC194A0A1B0GVG4 234 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 SPDYE16A6NNV3 312 aaPredicted RBP21.94■■□□□ 1.1
LMNB1-202ENST00000395354 ATP2B1P20020 1258 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 HERVK_113P62684 666 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 ATP2C1P98194 919 aaPredicted RBP21.94■■□□□ 1.1
LMNB1-202ENST00000395354 KRT25Q7Z3Z0 450 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 HOMER1Q86YM7 354 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 CLIC6Q96NY7 704 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 ADAMTS5Q9UNA0 930 aa21.94■■□□□ 1.1
LMNB1-202ENST00000395354 SMCO2A6NFE2 343 aa21.93■■□□□ 1.1
LMNB1-202ENST00000395354 VWA5AO00534 786 aa21.93■■□□□ 1.1
LMNB1-202ENST00000395354 SNAP25P60880 206 aa21.93■■□□□ 1.1
LMNB1-202ENST00000395354 FAM200AQ8TCP9 573 aa21.93■■□□□ 1.1
LMNB1-202ENST00000395354 KCNH3Q9ULD8 1083 aa21.93■■□□□ 1.1
LMNB1-202ENST00000395354 RLFQ13129 1914 aa21.93■■□□□ 1.1
LMNB1-202ENST00000395354 ZBED4O75132 1171 aa21.92■■□□□ 1.1
LMNB1-202ENST00000395354 FDX1P10109 184 aa21.92■■□□□ 1.1
LMNB1-202ENST00000395354 TAF1CQ15572 869 aaPredicted RBP21.92■■□□□ 1.1
LMNB1-202ENST00000395354 NOM1Q5C9Z4 860 aaKnown RBP21.92■■□□□ 1.1
LMNB1-202ENST00000395354 SMCR8Q8TEV9 937 aaPredicted RBP21.92■■□□□ 1.1
LMNB1-202ENST00000395354 PARK7Q99497 189 aaKnown RBP21.92■■□□□ 1.1
LMNB1-202ENST00000395354 CTDP1Q9Y5B0 961 aaPredicted RBP21.92■■□□□ 1.1
LMNB1-202ENST00000395354 ALDH1A1P00352 501 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 ZNF174Q15697 407 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 STX1AQ16623 288 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 ARL6IP4Q66PJ3 421 aaKnown RBP21.91■■□□□ 1.1
LMNB1-202ENST00000395354 LBX2Q6XYB7 198 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 RANBP17Q9H2T7 1088 aaKnown RBP21.91■■□□□ 1.1
LMNB1-202ENST00000395354 SLC38A10Q9HBR0 1119 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 PARP14Q460N5 1801 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 ZBTB5O15062 677 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 ADAMTS3O15072 1205 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 CDC37Q16543 378 aaPredicted RBP21.91■■□□□ 1.1
LMNB1-202ENST00000395354 POTEEQ6S8J3 1075 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 PDLIM2Q96JY6 352 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 KIAA1468Q9P260 1216 aa21.91■■□□□ 1.1
LMNB1-202ENST00000395354 PTGDRQ13258 359 aa21.9■■□□□ 1.1
LMNB1-202ENST00000395354 ORC2Q13416 577 aaPredicted RBP21.9■■□□□ 1.1
LMNB1-202ENST00000395354 ANO6Q4KMQ2 910 aa21.9■■□□□ 1.1
LMNB1-202ENST00000395354 CCDC174Q6PII3 467 aa21.9■■□□□ 1.1
LMNB1-202ENST00000395354 MB21D1Q8N884 522 aa21.9■■□□□ 1.1
LMNB1-202ENST00000395354 CSRNP2Q9H175 543 aa21.9■■□□□ 1.1
LMNB1-202ENST00000395354 ANO10Q9NW15 660 aa21.9■■□□□ 1.1
LMNB1-202ENST00000395354 RBPJLQ9UBG7 517 aa21.9■■□□□ 1.1
LMNB1-202ENST00000395354 GCLCP48506 637 aaPredicted RBP21.89■■□□□ 1.09
LMNB1-202ENST00000395354 NONOQ15233 471 aaKnown RBP eCLIP21.89■■□□□ 1.099e-7■■□□□ 12.5
LMNB1-202ENST00000395354 QRICH1Q2TAL8 776 aa21.89■■□□□ 1.09
LMNB1-202ENST00000395354 CPXCR1Q8N123 301 aa21.89■■□□□ 1.09
LMNB1-202ENST00000395354 DNAJC5GQ8N7S2 189 aa21.89■■□□□ 1.09
LMNB1-202ENST00000395354 GTF3C2Q8WUA4 911 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms