RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PRIMPOLQ96LW4 560 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 TMEM39BQ9GZU3 492 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 HACL1Q9UJ83 578 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 ZDHHC9Q9Y397 364 aa13.26□□□□□ -0.29
RTN1-203ENST00000395090 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 A0A1W2PRU2 124 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 PTGIRP43119 386 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 OCLNQ16625 522 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
RTN1-203ENST00000395090 MICU3Q86XE3 530 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 MYL10Q9BUA6 226 aa13.25□□□□□ -0.29
RTN1-203ENST00000395090 ADARB2Q9NS39 739 aaKnown RBP13.25□□□□□ -0.29
RTN1-203ENST00000395090 ASTN2O75129 1339 aaPredicted RBP13.25□□□□□ -0.29
RTN1-203ENST00000395090 GLTPD2A6NH11 291 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 JAK2O60674 1132 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 IL2RAP01589 272 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 FDPSP14324 419 aaKnown RBP13.24□□□□□ -0.29
RTN1-203ENST00000395090 RXRAP19793 462 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 PDCP20941 246 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 SYT1P21579 422 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 RELBQ01201 579 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 PKP1Q13835 747 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 RAB11FIP4Q86YS3 637 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 APOBEC3FQ8IUX4 373 aaKnown RBP13.24□□□□□ -0.29
RTN1-203ENST00000395090 TNS4Q8IZW8 715 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 MEIOBQ8N635 442 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 TMEM47Q9BQJ4 181 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 DEFB129Q9H1M3 183 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 PTPDC1A2A3K4 754 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 CPLX1O14810 134 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 DTNBO60941 627 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 CDKL5O76039 1030 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 TOP1P11387 765 aaKnown RBP13.24□□□□□ -0.29
RTN1-203ENST00000395090 IFNAR1P17181 557 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 WEE1P30291 646 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 CLN3Q13286 438 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 RTN1Q16799 776 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
RTN1-203ENST00000395090 CLEC17AQ6ZS10 378 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 RGS22Q8NE09 1264 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 MKL1Q969V6 931 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
RTN1-203ENST00000395090 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
RTN1-203ENST00000395090 CXXC1Q9P0U4 656 aaPredicted RBP13.24□□□□□ -0.29
RTN1-203ENST00000395090 STX6O43752 255 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 TTLL1O95922 423 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 EPHA4P54764 986 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 RRP1BQ14684 758 aaKnown RBP13.23□□□□□ -0.29
RTN1-203ENST00000395090 ANGEL2Q5VTE6 544 aaKnown RBP13.23□□□□□ -0.29
RTN1-203ENST00000395090 CPLX2Q6PUV4 134 aaKnown RBP13.23□□□□□ -0.29
RTN1-203ENST00000395090 TMEM179Q6ZVK1 233 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 NBPF11Q86T75 865 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 NUP133Q8WUM0 1156 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
RTN1-203ENST00000395090 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 KIF3AQ9Y496 699 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
RTN1-203ENST00000395090 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 CAPN5O15484 640 aaPredicted RBP13.22□□□□□ -0.29
RTN1-203ENST00000395090 GUCY1A2P33402 732 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 SMTNP53814 917 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 SIAH1Q8IUQ4 282 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 DDX11Q96FC9 970 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 NYAP2Q9P242 653 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
RTN1-203ENST00000395090 GREB1LQ9C091 1923 aaPredicted RBP13.22□□□□□ -0.29
RTN1-203ENST00000395090 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
RTN1-203ENST00000395090 A6NJY4 79 aa13.21□□□□□ -0.29
RTN1-203ENST00000395090 JAG1P78504 1218 aa13.21□□□□□ -0.29
RTN1-203ENST00000395090 GRM4Q14833 912 aa13.21□□□□□ -0.29
RTN1-203ENST00000395090 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.29
RTN1-203ENST00000395090 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.29
RTN1-203ENST00000395090 ORC3Q9UBD5 711 aaPredicted RBP13.21□□□□□ -0.29
RTN1-203ENST00000395090 MTMR6Q9Y217 621 aa13.21□□□□□ -0.29
RTN1-203ENST00000395090 FAM187AA6NFU0 413 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 MEN1O00255 615 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.3
RTN1-203ENST00000395090 SNHG28P0DPA3 235 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 KIF5BP33176 963 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 TLR1Q15399 786 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 MIGA2Q7L4E1 593 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 FAM184AQ8NB25 1140 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.3
RTN1-203ENST00000395090 HOOK2Q96ED9 719 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 ZNF395Q9H8N7 513 aaPredicted RBP13.21□□□□□ -0.3
RTN1-203ENST00000395090 STK36Q9NRP7 1315 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 GGA3Q9NZ52 723 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.3
RTN1-203ENST00000395090 GNEQ9Y223 722 aaKnown RBP13.21□□□□□ -0.3
RTN1-203ENST00000395090 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.3
RTN1-203ENST00000395090 POTECB2RU33 542 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms