RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 SYKP43405 635 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 SNAP25P60880 206 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 TRAF1Q13077 416 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 SH3D19Q5HYK7 790 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 NEK8Q86SG6 692 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 TIGD1Q96MW7 591 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 FAM13BQ9NYF5 915 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 DEFB115Q30KQ5 88 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 TREML2Q5T2D2 321 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 ARL6IP4Q66PJ3 421 aaKnown RBP27.92■■■□□ 2.06
CTF1-202ENST00000395019 CSRNP2Q9H175 543 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 RBSNQ9H1K0 784 aa27.92■■■□□ 2.06
CTF1-202ENST00000395019 RANBP17Q9H2T7 1088 aaKnown RBP27.92■■■□□ 2.06
CTF1-202ENST00000395019 VCAM1P19320 739 aa27.91■■■□□ 2.06
CTF1-202ENST00000395019 USP14P54578 494 aa27.91■■■□□ 2.06
CTF1-202ENST00000395019 ORC2Q13416 577 aaPredicted RBP27.91■■■□□ 2.06
CTF1-202ENST00000395019 CKAP2LQ8IYA6 745 aa27.91■■■□□ 2.06
CTF1-202ENST00000395019 TBCKQ8TEA7 893 aa27.91■■■□□ 2.06
CTF1-202ENST00000395019 C19orf81C9J6K1 198 aa27.9■■■□□ 2.06
CTF1-202ENST00000395019 XRCC6P12956 609 aaKnown RBP eCLIP27.9■■■□□ 2.06
CTF1-202ENST00000395019 SNAPC2Q13487 334 aa27.9■■■□□ 2.06
CTF1-202ENST00000395019 GADL1Q6ZQY3 521 aa27.9■■■□□ 2.06
CTF1-202ENST00000395019 C12orf42Q96LP6 360 aa27.9■■■□□ 2.06
CTF1-202ENST00000395019 KCNH3Q9ULD8 1083 aa27.9■■■□□ 2.06
CTF1-202ENST00000395019 CCDC192P0DO97 292 aa27.89■■■□□ 2.06
CTF1-202ENST00000395019 UBE2SQ16763 222 aa27.89■■■□□ 2.06
CTF1-202ENST00000395019 BRI3BPQ8WY22 251 aa27.89■■■□□ 2.06
CTF1-202ENST00000395019 KIFC2Q96AC6 838 aa27.89■■■□□ 2.06
CTF1-202ENST00000395019 CAPNS2Q96L46 248 aa27.89■■■□□ 2.06
CTF1-202ENST00000395019 LAD1O00515 517 aa27.89■■■□□ 2.05
CTF1-202ENST00000395019 AOC2O75106 756 aa27.89■■■□□ 2.05
CTF1-202ENST00000395019 CCDC102AQ96A19 550 aa27.89■■■□□ 2.05
CTF1-202ENST00000395019 SDF4Q9BRK5 362 aa27.89■■■□□ 2.05
CTF1-202ENST00000395019 HSPA6P17066 643 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 LETM2Q2VYF4 491 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 SPECC1Q5M775 1068 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 MCTP2Q6DN12 878 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 GPAT2Q6NUI2 795 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 TEX2Q8IWB9 1127 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 PTPN18Q99952 460 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 TMOD4Q9NZQ9 345 aa27.88■■■□□ 2.05
CTF1-202ENST00000395019 CCL15-CCL14A0A0B4J2E2 113 aa27.87■■■□□ 2.05
CTF1-202ENST00000395019 GTF2A2P52657 109 aa27.87■■■□□ 2.05
CTF1-202ENST00000395019 CCL15Q16663 113 aa27.87■■■□□ 2.05
CTF1-202ENST00000395019 USH1GQ495M9 461 aa27.87■■■□□ 2.05
CTF1-202ENST00000395019 RPAP3Q9H6T3 665 aaPredicted RBP27.87■■■□□ 2.05
CTF1-202ENST00000395019 FBXO28Q9NVF7 368 aa27.87■■■□□ 2.05
CTF1-202ENST00000395019 COL11A1P12107 1806 aaPredicted RBP27.87■■■□□ 2.05
CTF1-202ENST00000395019 CCNT1O60563 726 aaKnown RBP27.86■■■□□ 2.05
CTF1-202ENST00000395019 PRPHP41219 470 aa27.86■■■□□ 2.05
CTF1-202ENST00000395019 VWA3AA6NCI4 1184 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 TYRO3Q06418 890 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 AP3B2Q13367 1082 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 IL17AQ16552 155 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 PROCA1Q8NCQ7 364 aaPredicted RBP27.85■■■□□ 2.05
CTF1-202ENST00000395019 TMEM60Q9H2L4 133 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L15C9J2P7 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L13C9JLJ4 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L11C9JVI0 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L18D6R9N7 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L22D6RA61 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L17D6RBQ6 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L19D6RCP7 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L20D6RJB6 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 MEIS2O14770 477 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 EDIL3O43854 480 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 CETPP11597 493 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 VEGFBP49765 207 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L24Q0WX57 530 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 USP17L6PQ6QN14 398 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 SASS6Q6UVJ0 657 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 ELOA2Q8IYF1 753 aaPredicted RBP27.85■■■□□ 2.05
CTF1-202ENST00000395019 PRPF38AQ8NAV1 312 aaKnown RBP27.85■■■□□ 2.05
CTF1-202ENST00000395019 SLF1Q9BQI6 1058 aa27.85■■■□□ 2.05
CTF1-202ENST00000395019 THSD7BQ9C0I4 1608 aa27.84■■■□□ 2.05
CTF1-202ENST00000395019 LONP1P36776 959 aaKnown RBP27.84■■■□□ 2.05
CTF1-202ENST00000395019 USP49Q70CQ1 688 aa27.84■■■□□ 2.05
CTF1-202ENST00000395019 TESPA1A2RU30 521 aaPredicted RBP27.83■■■□□ 2.05
CTF1-202ENST00000395019 BTBD19C9JJ37 291 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 NEMFO60524 1076 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 CCDC174Q6PII3 467 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 DTHD1Q6ZMT9 781 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 KRBA2Q6ZNG9 492 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 FAM43AQ8N2R8 423 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 SYMPKQ92797 1274 aaKnown RBP27.83■■■□□ 2.05
CTF1-202ENST00000395019 TANGO6Q9C0B7 1094 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 AGTPBP1Q9UPW5 1226 aa27.83■■■□□ 2.05
CTF1-202ENST00000395019 PIK3CDO00329 1044 aa27.82■■■□□ 2.04
CTF1-202ENST00000395019 IGF2BP3O00425 579 aaKnown RBP eCLIP27.82■■■□□ 2.04
CTF1-202ENST00000395019 OPLAHO14841 1288 aa27.82■■■□□ 2.04
CTF1-202ENST00000395019 LONRF3Q496Y0 759 aa27.82■■■□□ 2.04
CTF1-202ENST00000395019 FASTKD5Q7L8L6 764 aaKnown RBP27.82■■■□□ 2.04
CTF1-202ENST00000395019 EPSTI1Q96J88 318 aa27.82■■■□□ 2.04
CTF1-202ENST00000395019 MANSC4A6NHS7 340 aaPredicted RBP27.81■■■□□ 2.04
CTF1-202ENST00000395019 OR52Z1P0C646 297 aa27.81■■■□□ 2.04
CTF1-202ENST00000395019 PPP4R3AQ6IN85 833 aa27.81■■■□□ 2.04
CTF1-202ENST00000395019 NAP1L4Q99733 375 aaKnown RBP27.81■■■□□ 2.04
CTF1-202ENST00000395019 ANO3Q9BYT9 981 aa27.81■■■□□ 2.04
CTF1-202ENST00000395019 SMCHD1A6NHR9 2005 aa27.81■■■□□ 2.04
CTF1-202ENST00000395019 ABCB11O95342 1321 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms