RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 GOLGA6L7A0A1B0GV03 622 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 ANO9A1A5B4 782 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 NELFCDQ8IXH7 590 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 ANKRD13CQ8N6S4 541 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 CNBD1Q8NA66 436 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 LARP4BQ92615 738 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 GOLGA8KD6RF30 607 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 CCDC172P0C7W6 258 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 RNASE9P60153 205 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 KCNB1Q14721 858 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 FUT8Q9BYC5 575 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 STK17AQ9UEE5 414 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 CNTNAP5Q8WYK1 1306 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 GOLGA6L10A0A0M3HER8 536 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 USP17L3A6NCW0 530 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 USP17L4A6NCW7 530 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 BMP6P22004 513 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 C2orf54Q08AI8 447 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 TROAPQ12815 778 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 RSRC2Q7L4I2 434 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 USP17L1Q7RTZ2 530 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 TBCKQ8TEA7 893 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 HINFPQ9BQA5 517 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 NT5C3AQ9H0P0 336 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 TBC1D7Q9P0N9 293 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 RIC1Q4ADV7 1423 aa12.92□□□□□ -0.34
UBE2D3-209ENST00000394804 FOXP2O15409 715 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 GNA14O95837 355 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 RPL13P26373 211 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 MNAT1P51948 309 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 USP14P54578 494 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 MDM2Q00987 491 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 RAD51AP2Q09MP3 1159 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 DCAF17Q5H9S7 520 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 ADSSL1Q8N142 457 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 VGLL2Q8N8G2 317 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 HNRNPLLQ8WVV9 542 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 RABEP2Q9H5N1 569 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 CAPN11Q9UMQ6 739 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 PP2D1A8MPX8 630 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 BUB1O43683 1085 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 GTF2A1P52655 376 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 CETN1Q12798 172 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 SEC23AQ15436 765 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 HAUS3Q68CZ6 603 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 FAM84BQ96KN1 310 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 FAM26FQ5R3K3 315 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 TMED8Q6PL24 325 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 TAX1BP1Q86VP1 789 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 GLT8D2Q9H1C3 349 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 NDST4Q9H3R1 872 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.341e-7■■□□□ 13.8
UBE2D3-209ENST00000394804 EIF4A3P38919 411 aaKnown RBP12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 KIF11P52732 1056 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 GNGT1P63211 74 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 ZFYVE27Q5T4F4 411 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 CAPS2Q9BXY5 557 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
UBE2D3-209ENST00000394804 KDM3AQ9Y4C1 1321 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 BTDP43251 543 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 RPS6KA1Q15418 735 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 FAM184BQ9ULE4 1060 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 XDHP47989 1333 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 EPHB4P54760 987 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 RASSF7Q02833 373 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 CCDC155Q8N6L0 562 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 CELF1Q92879 486 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 CCSER1Q9C0I3 900 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 EIF3CLB5ME19 914 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 MYO1CO00159 1063 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 ATP1A1P05023 1023 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 GRM4Q14833 912 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 KLHL7Q8IXQ5 586 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 BCAS4Q8TDM0 211 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 EIF3CQ99613 913 aaKnown RBP12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 RIC8AQ9NPQ8 531 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 PCDHA13Q9Y5I0 950 aa12.9□□□□□ -0.34
UBE2D3-209ENST00000394804 FRMPD2Q68DX3 1309 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 MOCS3O95396 460 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 POLR2FP61218 127 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 NSUN4Q96CB9 384 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 LRRC45Q96CN5 670 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 PCDHA12Q9UN75 941 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 CEP104O60308 925 aa12.89□□□□□ -0.35
UBE2D3-209ENST00000394804 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms