RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 USH1GQ495M9 461 aa16.92■□□□□ 0.3
CCT4-201ENST00000394440 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
CCT4-201ENST00000394440 MCTP2Q6DN12 878 aa16.92■□□□□ 0.3
CCT4-201ENST00000394440 FAM160B2Q86V87 743 aa16.92■□□□□ 0.3
CCT4-201ENST00000394440 TEX2Q8IWB9 1127 aa16.92■□□□□ 0.3
CCT4-201ENST00000394440 SMC2O95347 1197 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 CALCRLQ16602 461 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 GSDMAQ96QA5 445 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 HSD3B7Q9H2F3 369 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 ZNF112Q9UJU3 913 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 CASP1P29466 404 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 UBA7P41226 1012 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.91■□□□□ 0.3
CCT4-201ENST00000394440 MLKLQ8NB16 471 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 MBOAT7Q96N66 472 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 NAP1L4Q99733 375 aaKnown RBP16.91■□□□□ 0.3
CCT4-201ENST00000394440 TRIM5Q9C035 493 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
CCT4-201ENST00000394440 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.91■□□□□ 0.3
CCT4-201ENST00000394440 FEM1BQ9UK73 627 aa16.91■□□□□ 0.3
CCT4-201ENST00000394440 SSC5DA1L4H1 1573 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 SMTNL1A8MU46 457 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
CCT4-201ENST00000394440 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
CCT4-201ENST00000394440 TRAF1Q13077 416 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 DCAF15Q66K64 600 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 MOXD1Q6UVY6 613 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 LRRC15Q8TF66 581 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 MMTAG2Q9BU76 263 aaKnown RBP16.9■□□□□ 0.3
CCT4-201ENST00000394440 CYP3A7-CYP3A51PA0A087WV96 503 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 PIK3CDO00329 1044 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 GTPBP6O43824 516 aaPredicted RBP16.9■□□□□ 0.3
CCT4-201ENST00000394440 CYP3A7P24462 503 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 INPP5BP32019 993 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 STAT6P42226 847 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 EPS15P42566 896 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 USP11P51784 963 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 MRFAP1L1Q96HT8 127 aa16.9■□□□□ 0.3
CCT4-201ENST00000394440 CDC25BP30305 580 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 TECP42680 631 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 MYL5Q02045 173 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 CABP7Q86V35 215 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 LPAR1Q92633 364 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 HAS1Q92839 578 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 FBXO28Q9NVF7 368 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 DDX25Q9UHL0 483 aaKnown RBP16.89■□□□□ 0.29
CCT4-201ENST00000394440 PPP2R3BQ9Y5P8 575 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 PAPPA2Q9BXP8 1791 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 WDR46O15213 610 aaKnown RBP16.89■□□□□ 0.29
CCT4-201ENST00000394440 FOSP01100 380 aaPredicted RBP16.89■□□□□ 0.29
CCT4-201ENST00000394440 PTMAP06454 111 aaKnown RBP16.89■□□□□ 0.29
CCT4-201ENST00000394440 TXKP42681 527 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 RRAGBQ5VZM2 374 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 STAMQ92783 540 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 KIFC2Q96AC6 838 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 FEZ1Q99689 392 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 ZKSCAN5Q9Y2L8 839 aa16.89■□□□□ 0.29
CCT4-201ENST00000394440 PDIA5Q14554 519 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 HOOK2Q96ED9 719 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 CUEDC2Q9H467 287 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 KBTBD4Q9NVX7 518 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 RLFQ13129 1914 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
CCT4-201ENST00000394440 SREBF1P36956 1147 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 CUL4BQ13620 913 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 SCYL3Q8IZE3 742 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 MAGEF1Q9HAY2 307 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 DACH1Q9UI36 760 aa16.88■□□□□ 0.29
CCT4-201ENST00000394440 PLCG1P19174 1290 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 ARHGAP4P98171 946 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 CT47A1Q5JQC4 288 aaPredicted RBP16.87■□□□□ 0.29
CCT4-201ENST00000394440 KCNMB3Q9NPA1 279 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 PITPNM2Q9BZ72 1349 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 MYL1P05976 194 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 TMEM266Q2M3C6 531 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 MED15Q96RN5 788 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 WDR18Q9BV38 432 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 BLZF1Q9H2G9 400 aa16.87■□□□□ 0.29
CCT4-201ENST00000394440 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.293e-8■□□□□ 9.6
CCT4-201ENST00000394440 CCDC174Q6PII3 467 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 TTC12Q9H892 705 aaPredicted RBP16.86■□□□□ 0.29
CCT4-201ENST00000394440 LRWD1Q9UFC0 647 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 ZNF536O15090 1300 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 SPDYE3A6NKU9 549 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 DDNO94850 711 aaPredicted RBP16.86■□□□□ 0.29
CCT4-201ENST00000394440 ERCC5P28715 1186 aaPredicted RBP16.86■□□□□ 0.29
CCT4-201ENST00000394440 CIITAP33076 1130 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 TPM4P67936 248 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 PRAMEF18Q5VWM3 479 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 ENOX1Q8TC92 643 aaKnown RBP16.86■□□□□ 0.29
CCT4-201ENST00000394440 RAB34Q9BZG1 259 aa16.86■□□□□ 0.29
CCT4-201ENST00000394440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.86■□□□□ 0.298e-8■□□□□ 8.8
CCT4-201ENST00000394440 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 ABCB11O95342 1321 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 POTEMA6NI47 508 aa16.85■□□□□ 0.29
CCT4-201ENST00000394440 GRB10Q13322 594 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms