RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ADD1P35611 737 aaKnown RBP21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 SLC30A10Q6XR72 485 aa21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 SAMD3Q8N6K7 520 aa21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 TRPV1Q8NER1 839 aa21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 TBC1D5Q92609 795 aa21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 ALDH8A1Q9H2A2 487 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 FAM217BQ9NTX9 383 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-204ENST00000393546 MSCO60682 206 aa21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 SNAI1O95863 264 aaPredicted RBP21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 CFBP00751 764 aa21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 RGS19P49795 217 aa21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 ARMCX2Q7L311 632 aa21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 ZNF274Q96GC6 653 aaPredicted RBP21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 PURBQ96QR8 312 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 MAP3K20Q9NYL2 800 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 RBBP6Q7Z6E9 1792 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-204ENST00000393546 LOC102724159A0A0B4J2E5 919 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 B4DLN1 442 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 SEPT4O43236 478 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 MRPL12P52815 198 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 PWP2Q15269 919 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 ANKRD1Q15327 319 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 DNERQ8NFT8 737 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 MPHOSPH6Q99547 160 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 C22orf23Q9BZE7 217 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 CRISPLD2Q9H0B8 497 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 ABHD16BQ9H3Z7 469 aa21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 UPF2Q9HAU5 1272 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 DDX20Q9UHI6 824 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 V9GY48 417 aaPredicted RBP21.95■■□□□ 1.1
PDLIM7-204ENST00000393546 hCG_1642624A0A1W2PR95 340 aa21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 ALDH5A1P51649 535 aaPredicted RBP21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 CCT2P78371 535 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 FUT2Q10981 343 aa21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 ACVR2BQ13705 512 aa21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 LHX8Q68G74 356 aa21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 SYTL5Q8TDW5 730 aaPredicted RBP21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 LARP6Q9BRS8 491 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 NID2Q14112 1375 aa21.94■■□□□ 1.1
PDLIM7-204ENST00000393546 ASTN1O14525 1302 aa21.93■■□□□ 1.1
PDLIM7-204ENST00000393546 OPLAHO14841 1288 aa21.93■■□□□ 1.1
PDLIM7-204ENST00000393546 ZNF865P0CJ78 1059 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-204ENST00000393546 NEK4P51957 841 aa21.93■■□□□ 1.1
PDLIM7-204ENST00000393546 GHRHRQ02643 423 aa21.93■■□□□ 1.1
PDLIM7-204ENST00000393546 CNTNAP5Q8WYK1 1306 aa21.93■■□□□ 1.1
PDLIM7-204ENST00000393546 ZHX1Q9UKY1 873 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-204ENST00000393546 GCOM1H8Y6P7 765 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 POLR2MP0CAP2 368 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 HSD17B4P51659 736 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 MORC4Q8TE76 937 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 SHISA4Q96DD7 197 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 TAAR1Q96RJ0 339 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 OGDHLQ9ULD0 1010 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 FAM184BQ9ULE4 1060 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 MCM3APO60318 1980 aa21.92■■□□□ 1.1
PDLIM7-204ENST00000393546 AK2P54819 239 aa21.91■■□□□ 1.1
PDLIM7-204ENST00000393546 AKAP17AQ02040 695 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-204ENST00000393546 HEATR3Q7Z4Q2 680 aa21.91■■□□□ 1.1
PDLIM7-204ENST00000393546 NSUN6Q8TEA1 469 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-204ENST00000393546 RMDN3Q96TC7 470 aa21.91■■□□□ 1.1
PDLIM7-204ENST00000393546 AKR1A1P14550 325 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 HOXA13P31271 388 aaPredicted RBP21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 RBM25P49756 843 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 PDE4DQ08499 809 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 STK3Q13188 491 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 ARHGEF16Q5VV41 709 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 CPLX2Q6PUV4 134 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 ANKLE1Q8NAG6 615 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 CUL5Q93034 780 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 NCOA5Q9HCD5 579 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 COL20A1Q9P218 1284 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 RBM27Q9P2N5 1060 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 LCTP09848 1927 aa21.9■■□□□ 1.1
PDLIM7-204ENST00000393546 hCG_1984214I3L0E3 225 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 CPLX1O14810 134 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 PRPF3O43395 683 aaKnown RBP21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 RARBP10826 455 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 IFNAR1P17181 557 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 NTRK3Q16288 839 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 ANO1Q5XXA6 986 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 ZNF713Q8N859 430 aaPredicted RBP21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 IWS1Q96ST2 819 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 KATNBL1Q9H079 304 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 SLKQ9H2G2 1235 aaPredicted RBP21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 PSTPIP2Q9H939 334 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 VTA1Q9NP79 307 aa21.89■■□□□ 1.09
PDLIM7-204ENST00000393546 EDNRBP24530 442 aa21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 MLLT1Q03111 559 aaPredicted RBP21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 CCDC144BQ3MJ40 725 aa21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 EEPD1Q7L9B9 569 aa21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 FCHSD1Q86WN1 690 aa21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 ARRDC4Q8NCT1 418 aa21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 GPKOWQ92917 476 aaPredicted RBP eCLIP21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 PHKBQ93100 1093 aa21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 TPCN1Q9ULQ1 816 aa21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 DDX49Q9Y6V7 483 aaKnown RBP21.88■■□□□ 1.09
PDLIM7-204ENST00000393546 FARP2O94887 1054 aaPredicted RBP21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 NAPAP54920 295 aa21.87■■□□□ 1.09
PDLIM7-204ENST00000393546 PFKFB3Q16875 520 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms