RNA–Protein interactions for RNA: ENST00000393438.6

RUFY1-202, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUFY1, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-202ENST00000393438 DEPTORQ8TB45 409 aa15.4■□□□□ 0.06
RUFY1-202ENST00000393438 GJD4Q96KN9 370 aaPredicted RBP15.4■□□□□ 0.06
RUFY1-202ENST00000393438 CLIC6Q96NY7 704 aa15.4■□□□□ 0.06
RUFY1-202ENST00000393438 R3HDM2Q9Y2K5 976 aaKnown RBP15.4■□□□□ 0.06
RUFY1-202ENST00000393438 CHMP3Q9Y3E7 222 aa15.4■□□□□ 0.06
RUFY1-202ENST00000393438 CSPG5O95196 566 aa15.4■□□□□ 0.06
RUFY1-202ENST00000393438 C10orf76Q5T2E6 689 aa15.4■□□□□ 0.06
RUFY1-202ENST00000393438 OPTNQ96CV9 577 aa15.4■□□□□ 0.06
RUFY1-202ENST00000393438 XPO7Q9UIA9 1087 aaKnown RBP15.4■□□□□ 0.06
RUFY1-202ENST00000393438 TPCN1Q9ULQ1 816 aa15.4■□□□□ 0.06
RUFY1-202ENST00000393438 NEURL1BA8MQ27 555 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 TTC34A8MYJ7 566 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 KCNQ2O43526 872 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 ST18O60284 1047 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 CD53P19397 219 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 LBRQ14739 615 aaKnown RBP15.39■□□□□ 0.05
RUFY1-202ENST00000393438 LINC00469Q8N7U9 141 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 ZNF713Q8N859 430 aaPredicted RBP15.39■□□□□ 0.05
RUFY1-202ENST00000393438 PCMTD2Q9NV79 361 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 ZNF330Q9Y3S2 320 aaPredicted RBP15.39■□□□□ 0.05
RUFY1-202ENST00000393438 GRM8O00222 908 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 CLASP2O75122 1294 aaKnown RBP15.39■□□□□ 0.05
RUFY1-202ENST00000393438 RAB11FIP4Q86YS3 637 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 SMC1BQ8NDV3 1235 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 CACTINQ8WUQ7 758 aaKnown RBP15.39■□□□□ 0.05
RUFY1-202ENST00000393438 OSBPL3Q9H4L5 887 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 WDR70Q9NW82 654 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 HOOK1Q9UJC3 728 aaKnown RBP15.39■□□□□ 0.05
RUFY1-202ENST00000393438 CNPY2Q9Y2B0 182 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 NUP188Q5SRE5 1749 aa15.39■□□□□ 0.05
RUFY1-202ENST00000393438 ARHGAP25P42331 645 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 CFAP157Q5JU67 520 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 ALKBH2Q6NS38 261 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 TMEM151BQ8IW70 566 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 MAIP1Q8WWC4 291 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
RUFY1-202ENST00000393438 SH3GLB1Q9Y371 365 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 MYPNQ86TC9 1320 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 THSD7AQ9UPZ6 1657 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 TJP1Q07157 1748 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 HTR3EA5X5Y0 456 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 TRIM43BA6NCK2 446 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 ATP5J2-PTCD1G3V325 749 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 H0Y3Z8 333 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 ATP4AP20648 1035 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 PSMC4P43686 418 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 GUCY2FP51841 1108 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 TRIM50Q86XT4 487 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 GDAP1Q8TB36 358 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 C1orf74Q96LT6 269 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 WDR35Q9P2L0 1181 aa15.38■□□□□ 0.05
RUFY1-202ENST00000393438 CYP19A1P11511 503 aaPredicted RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 TCF3P15923 654 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 GCKRQ14397 625 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 WHAMMP3Q1A5X7 153 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 CCDC40Q4G0X9 1142 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 ABHD8Q96I13 439 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 CCT7Q99832 543 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 CIDEBQ9UHD4 219 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 SFMBT1Q9UHJ3 866 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 TRPC5Q9UL62 973 aaPredicted RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 NOSIPQ9Y314 301 aaKnown RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 SALL3Q9BXA9 1300 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 SKIP12755 728 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 CNGA1P29973 690 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 CCT5P48643 541 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 TUFMP49411 452 aaKnown RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 POLR2FP61218 127 aaKnown RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 BLMHQ13867 455 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 ZSCAN25Q6NSZ9 544 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 PPFIBP1Q86W92 1011 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 SYT2Q8N9I0 419 aaPredicted RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 KLHDC4Q8TBB5 520 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 WDR66Q8TBY9 1149 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 FAM71BQ8TC56 605 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 GIPC2Q8TF65 315 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 DYDC1Q8WWB3 177 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 NAF1Q96HR8 494 aaKnown RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 EIF2AQ9BY44 585 aaKnown RBP15.37■□□□□ 0.05
RUFY1-202ENST00000393438 ZBTB3Q9H5J0 574 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 ZDHHC9Q9Y397 364 aa15.37■□□□□ 0.05
RUFY1-202ENST00000393438 UTYO14607 1347 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 SLC16A2P36021 539 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 TNIP2Q8NFZ5 429 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 SSH3Q8TE77 659 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 STK39Q9UEW8 545 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 TEX28O15482 410 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 MGRN1O60291 552 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 BPIFB4P59827 614 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 GRAMD2AQ8IUY3 354 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 VPS52Q8N1B4 723 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 ZNF653Q96CK0 615 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 ANO10Q9NW15 660 aa15.36■□□□□ 0.05
RUFY1-202ENST00000393438 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
RUFY1-202ENST00000393438 LRMPQ12912 555 aa15.35■□□□□ 0.05
RUFY1-202ENST00000393438 FAM182BQ5T319 152 aa15.35■□□□□ 0.05
RUFY1-202ENST00000393438 ARL6IP6Q8N6S5 226 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms