RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 CCDC178Q5BJE1 867 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 PSRC1Q6PGN9 363 aaPredicted RBP14.51□□□□□ -0.09
CTSC-202ENST00000393301 MFSD6Q6ZSS7 791 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 C16orf59Q7L2K0 433 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 FBXO16Q8IX29 292 aaPredicted RBP14.51□□□□□ -0.09
CTSC-202ENST00000393301 DNERQ8NFT8 737 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 ESR2Q92731 530 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.51□□□□□ -0.09
CTSC-202ENST00000393301 DSCC1Q9BVC3 393 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 KIAA1217Q5T5P2 1943 aa14.51□□□□□ -0.09
CTSC-202ENST00000393301 NEDD4P46934 1319 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 HIP1O00291 1037 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 NKRFO15226 690 aaKnown RBP eCLIP14.5□□□□□ -0.09
CTSC-202ENST00000393301 PDE4AP27815 886 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 SLC16A2P36021 539 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 SNAP25P60880 206 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 BEX3Q00994 111 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 ITGA7Q13683 1181 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 BAATQ14032 418 aaPredicted RBP14.5□□□□□ -0.09
CTSC-202ENST00000393301 CXCL17Q6UXB2 119 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 NSMFQ6X4W1 530 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 TMEM199Q8N511 208 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 AP5M1Q9H0R1 490 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 PDGFCQ9NRA1 345 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 ISY1Q9ULR0 285 aaKnown RBP14.5□□□□□ -0.09
CTSC-202ENST00000393301 TANC1Q9C0D5 1861 aa14.5□□□□□ -0.09
CTSC-202ENST00000393301 GBF1Q92538 1859 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 TRIM6-TRIM34B2RNG4 842 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 DNAJB2P25686 324 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 HAND2P61296 217 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 SLC30A10Q6XR72 485 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.49□□□□□ -0.09
CTSC-202ENST00000393301 HERVK_113Q902F9 699 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 IL23AQ9NPF7 189 aa14.49□□□□□ -0.09
CTSC-202ENST00000393301 FRMPD2Q68DX3 1309 aaPredicted RBP14.48□□□□□ -0.09
CTSC-202ENST00000393301 DYNC1LI2O43237 492 aaPredicted RBP14.48□□□□□ -0.09
CTSC-202ENST00000393301 CSF2RAP15509 400 aa14.48□□□□□ -0.09
CTSC-202ENST00000393301 RPS6P62753 249 aaKnown RBP14.48□□□□□ -0.09
CTSC-202ENST00000393301 GHRHRQ02643 423 aa14.48□□□□□ -0.09
CTSC-202ENST00000393301 RRP12Q5JTH9 1297 aaKnown RBP14.48□□□□□ -0.09
CTSC-202ENST00000393301 FAM161BQ96MY7 647 aa14.48□□□□□ -0.09
CTSC-202ENST00000393301 PURBQ96QR8 312 aaKnown RBP14.48□□□□□ -0.09
CTSC-202ENST00000393301 NOC4LQ9BVI4 516 aaKnown RBP14.48□□□□□ -0.09
CTSC-202ENST00000393301 TOMM22Q9NS69 142 aa14.48□□□□□ -0.09
CTSC-202ENST00000393301 POLR3EQ9NVU0 708 aa14.48□□□□□ -0.09
CTSC-202ENST00000393301 ZNF213O14771 459 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 CPT1AP50416 773 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 PURAQ00577 322 aaKnown RBP14.47□□□□□ -0.09
CTSC-202ENST00000393301 TMEM63BQ5T3F8 832 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 RNF207Q6ZRF8 634 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 KIAA1211Q6ZU35 1233 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 IQCA1Q86XH1 822 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 MAFAQ8NHW3 353 aaPredicted RBP14.47□□□□□ -0.09
CTSC-202ENST00000393301 RILPL2Q969X0 211 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 VWCEQ96DN2 955 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 MPHOSPH6Q99547 160 aaKnown RBP14.47□□□□□ -0.09
CTSC-202ENST00000393301 WDR11Q9BZH6 1224 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 HIPK3Q9H422 1215 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 GPCPD1Q9NPB8 672 aa14.47□□□□□ -0.09
CTSC-202ENST00000393301 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
CTSC-202ENST00000393301 A6NJR5 290 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 B4DLN1 442 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 B4GALT4O60513 344 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 KPNA6O60684 536 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 MRPL12P52815 198 aaKnown RBP14.46□□□□□ -0.09
CTSC-202ENST00000393301 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 BMP2KLQ5H9B9 411 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 TTC22Q5TAA0 569 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 NOL8Q76FK4 1167 aaKnown RBP14.46□□□□□ -0.09
CTSC-202ENST00000393301 EEPD1Q7L9B9 569 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 PNMA1Q8ND90 353 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 SCFD2Q8WU76 684 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 MYLIPQ8WY64 445 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 VTI1AQ96AJ9 217 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 WNT8AQ9H1J5 351 aa14.46□□□□□ -0.09
CTSC-202ENST00000393301 ALDH8A1Q9H2A2 487 aaPredicted RBP14.46□□□□□ -0.09
CTSC-202ENST00000393301 ABCB11O95342 1321 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 RAD50Q92878 1312 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 PTPDC1A2A3K4 754 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 PFKMP08237 780 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 SUPT20HL2P0C7V6 817 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 PTGS1P23219 599 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 CYP2C18P33260 490 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 PTPN11Q06124 597 aaPredicted RBP14.45□□□□□ -0.1
CTSC-202ENST00000393301 CCDC62Q6P9F0 684 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 ZNF365Q70YC5 407 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 ENAHQ8N8S7 591 aaPredicted RBP14.45□□□□□ -0.1
CTSC-202ENST00000393301 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 TIFAQ96CG3 184 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 ZSCAN10Q96SZ4 725 aaPredicted RBP14.45□□□□□ -0.1
CTSC-202ENST00000393301 COL25A1Q9BXS0 654 aaPredicted RBP14.45□□□□□ -0.1
CTSC-202ENST00000393301 PBX4Q9BYU1 374 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 PPP1R12CQ9BZL4 782 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 MTIF3Q9H2K0 278 aaKnown RBP14.45□□□□□ -0.1
CTSC-202ENST00000393301 DIAPH3Q9NSV4 1193 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 CTNNA3Q9UI47 895 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 MTMR7Q9Y216 660 aa14.45□□□□□ -0.1
CTSC-202ENST00000393301 UMODL1Q5DID0 1318 aa14.44□□□□□ -0.1
CTSC-202ENST00000393301 TET1Q8NFU7 2136 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms