RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 CTR9Q6PD62 1173 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 TMTC3Q6ZXV5 915 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 USP50Q70EL3 339 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-203ENST00000393287 ZSCAN30Q86W11 494 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 NSUN6Q8TEA1 469 aaKnown RBP8.99□□□□□ -0.97
ATXN3-203ENST00000393287 CCDC94Q9BW85 323 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-203ENST00000393287 POLR3EQ9NVU0 708 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 GCNT3O95395 438 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 BRD1O95696 1058 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 GTF2A2P52657 109 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 XRRA1Q6P2D8 792 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 ANKRD13AQ8IZ07 590 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 PDCL2Q8N4E4 241 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 PRPF38AQ8NAV1 312 aaKnown RBP8.99□□□□□ -0.97
ATXN3-203ENST00000393287 PIGSQ96S52 555 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 MMRN2Q9H8L6 949 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 TPCN1Q9ULQ1 816 aa8.99□□□□□ -0.97
ATXN3-203ENST00000393287 TOPAZ1Q8N9V7 1692 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 YY1P25490 414 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 NECTIN1Q15223 517 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 TRMT1LQ7Z2T5 733 aaKnown RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 MYOCDQ8IZQ8 938 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 ADCY5O95622 1261 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 PPP4CP60510 307 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 KCTD1Q719H9 257 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 ZNF589Q86UQ0 364 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 PFASO15067 1338 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 SLC7A3Q8WY07 619 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 NAP1L3Q99457 506 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 LMO7Q8WWI1 1683 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 FCER1AP12319 257 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 CPA1P15085 419 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 NOP2P46087 812 aaKnown RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 KRT76Q01546 638 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 SCRN1Q12765 414 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 TTLL4Q14679 1199 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 INF2Q27J81 1249 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 CCDC91Q7Z6B0 441 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 FBXO18Q8NFZ0 1043 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 CSRNP2Q9H175 543 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 LUC7L2Q9Y383 392 aaKnown RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 SPDYE2BA6NHP3 402 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 EXOC3O60645 756 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 ZNF202O95125 648 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 SPDYE6P0CI01 402 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 CDC42EP5Q6NZY7 148 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 TRMT44Q8IYL2 757 aaKnown RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 CACTINQ8WUQ7 758 aaKnown RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 CCDC51Q96ER9 411 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 TIPINQ9BVW5 301 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 IMPACTQ9P2X3 320 aa8.98□□□□□ -0.97
ATXN3-203ENST00000393287 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.98□□□□□ -0.97
ATXN3-203ENST00000393287 POLR2DO15514 142 aaKnown RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 CELF2O95319 508 aaKnown RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 KIF11P52732 1056 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 C12orf60Q5U649 245 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 CSGALNACT2Q8N6G5 542 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ACCSQ96QU6 501 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 PANK4Q9NVE7 773 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 STAM2O75886 525 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ALDH1A1P00352 501 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 RPLP2P05387 115 aaKnown RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 CCDC175P0C221 793 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 GOLGA8HP0CJ92 632 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 UBXN2AP68543 259 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ASIC2Q16515 512 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 PFKFB3Q16875 520 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 FAM47CQ5HY64 1035 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 CEP135Q66GS9 1140 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 CCDC42Q96M95 316 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 C16orf86Q6ZW13 317 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 SRRTQ9BXP5 876 aaKnown RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 EHD4Q9H223 541 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 TMCO5BA8MYB1 307 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 EZRP15311 586 aaKnown RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ZSCAN20P17040 1043 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ZNF157P51786 506 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 TNFAIP2Q03169 654 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 DCAF17Q5H9S7 520 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 BBXQ8WY36 941 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 DYNLL2Q96FJ2 89 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 FAM20AQ96MK3 541 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 TSNARE1Q96NA8 513 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ANO3Q9BYT9 981 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 LRFN2Q9ULH4 789 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 PAXBP1Q9Y5B6 917 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 K7ENM7 598 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 CHST13Q8NET6 341 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ZDHHC15Q96MV8 337 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 TRERF1Q96PN7 1200 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 ZSWIM5Q9P217 1185 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 SYNPO2Q9UMS6 1093 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 GLTPD2A6NH11 291 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 PPFIA3O75145 1194 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 FKBP1CQ5VVH2 108 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 GABPB2Q8TAK5 448 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 CPLX3Q8WVH0 158 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms