RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 CALML3P27482 149 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 E2F4Q16254 413 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 CYP2W1Q8TAV3 490 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 SH2D4AQ9H788 454 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 PTGDRQ13258 359 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 FBXO11Q86XK2 927 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 PROCA1Q8NCQ7 364 aaPredicted RBP12.35□□□□□ -0.43
PDGFD-202ENST00000393158 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 ETNPPLQ8TBG4 499 aa12.35□□□□□ -0.43
PDGFD-202ENST00000393158 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
PDGFD-202ENST00000393158 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
PDGFD-202ENST00000393158 ADCY7P51828 1080 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 USP14P54578 494 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 TTC38Q5R3I4 469 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 REXO1Q8N1G1 1221 aaKnown RBP12.34□□□□□ -0.43
PDGFD-202ENST00000393158 IL31RAQ8NI17 732 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 KCNMB3Q9NPA1 279 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 PICK1Q9NRD5 415 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 SREBF1P36956 1147 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 ZNF174Q15697 407 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 CCDC174Q6PII3 467 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.34□□□□□ -0.43
PDGFD-202ENST00000393158 TESPA1A2RU30 521 aaPredicted RBP12.34□□□□□ -0.43
PDGFD-202ENST00000393158 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
PDGFD-202ENST00000393158 TRIM29Q14134 588 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 NAALADL2Q58DX5 795 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 SPECC1Q5M775 1068 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 PPP4R3AQ6IN85 833 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 DDX49Q9Y6V7 483 aaKnown RBP12.34□□□□□ -0.43
PDGFD-202ENST00000393158 MYPNQ86TC9 1320 aa12.34□□□□□ -0.43
PDGFD-202ENST00000393158 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 FSTL1Q12841 308 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 SLC30A10Q6XR72 485 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 RBPJLQ9UBG7 517 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 A0A1B0GVL5 298 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 CXCL11O14625 94 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 CMA1P23946 247 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 CIITAP33076 1130 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 ZNF445P59923 1031 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 AKAP17AQ02040 695 aaKnown RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 Q3C1V9 767 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 SAPCD2Q86UD0 394 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 IGSF22Q8N9C0 903 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 BRI3BPQ8WY22 251 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 EPSTI1Q96J88 318 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 AS3MTQ9HBK9 375 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 RAD21O60216 631 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 RGS20O76081 388 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 CYP3A4P08684 503 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 PFKFB1P16118 471 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 CAVIN1Q6NZI2 390 aaKnown RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 CHURC1Q8WUH1 139 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 CUL5Q93034 780 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
PDGFD-202ENST00000393158 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
PDGFD-202ENST00000393158 FLOT1O75955 427 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 MRPS9P82933 396 aaKnown RBP12.32□□□□□ -0.44
PDGFD-202ENST00000393158 ECM1Q16610 540 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
PDGFD-202ENST00000393158 GNA11P29992 359 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 DACT1Q9NYF0 836 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 FOXN1O15353 648 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
PDGFD-202ENST00000393158 OAZ1P54368 228 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 FKBP1BP68106 108 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 ANO3Q9BYT9 981 aa12.32□□□□□ -0.44
PDGFD-202ENST00000393158 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
PDGFD-202ENST00000393158 XBP1P17861 261 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 CAP1Q01518 475 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 COG2Q14746 738 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 SH3RF1Q7Z6J0 888 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 FEZ1Q99689 392 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 NUDT12Q9BQG2 462 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 TANGO6Q9C0B7 1094 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 SIP14410 1827 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 BMP6P22004 513 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 MCM7P33993 719 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 KRT25Q7Z3Z0 450 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 NEK8Q86SG6 692 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 ZIC5Q96T25 663 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 GBA2Q9HCG7 927 aaPredicted RBP12.31□□□□□ -0.44
PDGFD-202ENST00000393158 ABCB11O95342 1321 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 CELF2O95319 508 aaKnown RBP12.31□□□□□ -0.44
PDGFD-202ENST00000393158 NONOQ15233 471 aaKnown RBP eCLIP12.31□□□□□ -0.44
PDGFD-202ENST00000393158 SPRYD7Q5W111 196 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms