RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 NUP133Q8WUM0 1156 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 MTMR8Q96EF0 704 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 CAPS2Q9BXY5 557 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 RBM12Q9NTZ6 932 aaKnown RBP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 LTBP1Q14766 1721 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 NCK2O43639 380 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 FSBPO95073 299 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 MYBP10242 640 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 HSP90B2PQ58FF3 399 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 SUSD4Q5VX71 490 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 HGSNATQ68CP4 663 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 BCAS4Q8TDM0 211 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 LPIN2Q92539 896 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 RNPC3Q96LT9 517 aaKnown RBP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 ZSCAN10Q96SZ4 725 aaPredicted RBP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 THAP9Q9H5L6 903 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 GDF3Q9NR23 364 aa12.75□□□□□ -0.37
PDCD4-202ENST00000393104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
PDCD4-202ENST00000393104 H0YGN5 161 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 CXCR5P32302 372 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 PUM3Q15397 648 aaKnown RBP12.74□□□□□ -0.37
PDCD4-202ENST00000393104 FILIP1LQ4L180 1135 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 FAM76AQ8TAV0 307 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 BAP1Q92560 729 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 MS4A14Q96JA4 679 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 NYXQ9GZU5 481 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 LUC7L2Q9Y383 392 aaKnown RBP12.74□□□□□ -0.37
PDCD4-202ENST00000393104 NFS1Q9Y697 457 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 STK4Q13043 487 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 PDCLQ13371 301 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 KCNB1Q14721 858 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 KLHDC7AQ5VTJ3 777 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 SEMA6BQ9H3T3 888 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 DISC1Q9NRI5 854 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 CCDC88AQ3V6T2 1871 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 ZEB2O60315 1214 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 RASSF9O75901 435 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 ERLIN2O94905 339 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 EEF1GP26641 437 aaKnown RBP12.74□□□□□ -0.37
PDCD4-202ENST00000393104 VAV2P52735 878 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 GNGT1P63211 74 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 SND1Q7KZF4 910 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDCD4-202ENST00000393104 KIAA0895Q8NCT3 520 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 HPS3Q969F9 1004 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 OSBPL9Q96SU4 736 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 PLAGL2Q9UPG8 496 aa12.74□□□□□ -0.37
PDCD4-202ENST00000393104 MACROD2A1Z1Q3 448 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 MOCS3O95396 460 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 PIK3AP1Q6ZUJ8 805 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 ERGIC2Q96RQ1 377 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 ANKRD31Q8N7Z5 1873 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 A0A1W2PQJ5 194 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 CARSP49589 748 aaKnown RBP12.73□□□□□ -0.37
PDCD4-202ENST00000393104 DDR1Q08345 913 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 FIGNQ5HY92 759 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 MYH4Q9Y623 1939 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 MROH5Q6ZUA9 1318 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 TLR2O60603 784 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 TUBGCP2Q9BSJ2 902 aa12.73□□□□□ -0.37
PDCD4-202ENST00000393104 MMTAG2Q9BU76 263 aaKnown RBP12.73□□□□□ -0.37
PDCD4-202ENST00000393104 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
PDCD4-202ENST00000393104 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
PDCD4-202ENST00000393104 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 FCER1AP12319 257 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 MCM7P33993 719 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 ZBED6P86452 979 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 DPY19L2P1Q6NXN4 242 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 CCDC170Q8IYT3 715 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 PJA2O43164 708 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 IDEP14735 1019 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
PDCD4-202ENST00000393104 GUCY1A3Q02108 690 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 SPAG1Q07617 926 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 RASGRP4Q8TDF6 673 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
PDCD4-202ENST00000393104 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 ITGB3BPQ13352 177 aaPredicted RBP12.72□□□□□ -0.37
PDCD4-202ENST00000393104 NAA35Q5VZE5 725 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 AMOTL1Q8IY63 956 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 TMEM59LQ9UK28 342 aa12.72□□□□□ -0.37
PDCD4-202ENST00000393104 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
PDCD4-202ENST00000393104 UAP1Q16222 522 aaPredicted RBP12.71□□□□□ -0.37
PDCD4-202ENST00000393104 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
PDCD4-202ENST00000393104 KDM7AQ6ZMT4 941 aa12.71□□□□□ -0.37
PDCD4-202ENST00000393104 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
PDCD4-202ENST00000393104 CNNM1Q9NRU3 951 aa12.71□□□□□ -0.37
PDCD4-202ENST00000393104 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.37
PDCD4-202ENST00000393104 NOL4O94818 638 aa12.71□□□□□ -0.38
PDCD4-202ENST00000393104 LSP1P33241 339 aa12.71□□□□□ -0.38
PDCD4-202ENST00000393104 SEC24CP53992 1094 aa12.71□□□□□ -0.38
PDCD4-202ENST00000393104 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms