RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 HNRNPH1P31943 449 aaKnown RBP16.77■□□□□ 0.28
SHTN1-204ENST00000392903 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
SHTN1-204ENST00000392903 RIN2Q8WYP3 895 aaPredicted RBP16.77■□□□□ 0.28
SHTN1-204ENST00000392903 ANKS1AQ92625 1134 aa16.77■□□□□ 0.28
SHTN1-204ENST00000392903 CXorf56Q9H5V9 222 aa16.77■□□□□ 0.28
SHTN1-204ENST00000392903 PCDHA4Q9UN74 947 aa16.77■□□□□ 0.28
SHTN1-204ENST00000392903 CALML3P27482 149 aa16.77■□□□□ 0.27
SHTN1-204ENST00000392903 VAT1LQ9HCJ6 419 aa16.77■□□□□ 0.27
SHTN1-204ENST00000392903 FLT1P17948 1338 aa16.77■□□□□ 0.27
SHTN1-204ENST00000392903 ROBO3Q96MS0 1386 aa16.77■□□□□ 0.27
SHTN1-204ENST00000392903 GOLGA6CA6NDK9 693 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 KLRF2D3W0D1 207 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
SHTN1-204ENST00000392903 GOLGA6DP0CG33 693 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 RHBDL3P58872 404 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 DPYDQ12882 1025 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 PPFIA1Q13136 1202 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 PICALMQ13492 652 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 SH3RF1Q7Z6J0 888 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 SECISBP2LQ93073 1101 aaKnown RBP16.76■□□□□ 0.27
SHTN1-204ENST00000392903 GOLGA6AQ9NYA3 693 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 CCDC194A0A1B0GVG4 234 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 TRIM14Q14142 442 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 KCNV1Q6PIU1 500 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 GBP6Q6ZN66 633 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 ANKRD20A12PQ8NF67 263 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
SHTN1-204ENST00000392903 NAV1Q8NEY1 1877 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 MAP2K2P36507 400 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 GNAQP50148 359 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 INF2Q27J81 1249 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 RPAINQ86UA6 219 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 PROM2Q8N271 834 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 PCDHA6Q9UN73 950 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 PCDHA8Q9Y5H6 950 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 CDK5RAP2Q96SN8 1893 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
SHTN1-204ENST00000392903 MNAT1P51948 309 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 SKIDA1Q1XH10 827 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 PAPD7Q5XG87 772 aaKnown RBP16.75■□□□□ 0.27
SHTN1-204ENST00000392903 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 CNPY4Q8N129 248 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 SELENOOQ9BVL4 669 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 ZNF287Q9HBT7 754 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
SHTN1-204ENST00000392903 ATXN2Q99700 1313 aaKnown RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 LRRC10BA6NIK2 292 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 CCDC172P0C7W6 258 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 CCDC178Q5BJE1 867 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 SLC27A3Q5K4L6 730 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 CCNI2Q6ZMN8 369 aaPredicted RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 C4orf32Q8N8J7 132 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 MTRQ99707 1265 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 SAR1BQ9Y6B6 198 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 SHTN1A0MZ66 631 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 PP2D1A8MPX8 630 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 EIF3HO15372 352 aaKnown RBP eCLIP16.74■□□□□ 0.272e-7■■□□□ 13.2
SHTN1-204ENST00000392903 CKAP4Q07065 602 aaKnown RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 SF3B2Q13435 895 aaKnown RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 BCAS4Q8TDM0 211 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 PLIN2Q99541 437 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 CAPS2Q9BXY5 557 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 HAUS4Q9H6D7 363 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 BARHL2Q9NY43 387 aa16.74■□□□□ 0.27
SHTN1-204ENST00000392903 LIMA1Q9UHB6 759 aaKnown RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 REXO2Q9Y3B8 237 aaKnown RBP16.74■□□□□ 0.27
SHTN1-204ENST00000392903 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
SHTN1-204ENST00000392903 GOLGA6BA6NDN3 693 aa16.73■□□□□ 0.27
SHTN1-204ENST00000392903 STXBP3O00186 592 aa16.73■□□□□ 0.27
SHTN1-204ENST00000392903 PPEF1O14829 653 aaPredicted RBP16.73■□□□□ 0.27
SHTN1-204ENST00000392903 INPP5BP32019 993 aa16.73■□□□□ 0.27
SHTN1-204ENST00000392903 FBXW10Q5XX13 1052 aa16.73■□□□□ 0.27
SHTN1-204ENST00000392903 PRPF38AQ8NAV1 312 aaKnown RBP16.73■□□□□ 0.27
SHTN1-204ENST00000392903 TMEM60Q9H2L4 133 aa16.73■□□□□ 0.27
SHTN1-204ENST00000392903 GUCA1BQ9UMX6 200 aa16.73■□□□□ 0.27
SHTN1-204ENST00000392903 EPN1Q9Y6I3 576 aaPredicted RBP16.73■□□□□ 0.27
SHTN1-204ENST00000392903 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 RNF225M0QZC1 329 aaPredicted RBP16.72■□□□□ 0.27
SHTN1-204ENST00000392903 M0R2N6 131 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 NDUFA10O95299 355 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
SHTN1-204ENST00000392903 PLCG2P16885 1265 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 EIF6P56537 245 aaKnown RBP16.72■□□□□ 0.27
SHTN1-204ENST00000392903 TXNRD1Q16881 649 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 PDXDC2PQ6P474 469 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 KRT27Q7Z3Y8 459 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 NUP88Q99567 741 aaPredicted RBP16.72■□□□□ 0.27
SHTN1-204ENST00000392903 UBA5Q9GZZ9 404 aa16.72■□□□□ 0.27
SHTN1-204ENST00000392903 DONSONQ9NYP3 566 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms