RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 UBE2SQ16763 222 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 SYDE2Q5VT97 1194 aa22.62■■□□□ 1.21
PTPN11-202ENST00000392597 TRMT44Q8IYL2 757 aaKnown RBP22.62■■□□□ 1.21
PTPN11-202ENST00000392597 NAP1L5Q96NT1 182 aaPredicted RBP22.62■■□□□ 1.21
PTPN11-202ENST00000392597 MYH7BA7E2Y1 1941 aa22.61■■□□□ 1.21
PTPN11-202ENST00000392597 CIAPIN1Q6FI81 312 aa22.61■■□□□ 1.21
PTPN11-202ENST00000392597 VSTM4Q8IW00 320 aa22.61■■□□□ 1.21
PTPN11-202ENST00000392597 TEX2Q8IWB9 1127 aa22.61■■□□□ 1.21
PTPN11-202ENST00000392597 AMNQ9BXJ7 453 aa22.61■■□□□ 1.21
PTPN11-202ENST00000392597 CDK11BP21127 795 aaKnown RBP22.6■■□□□ 1.21
PTPN11-202ENST00000392597 TECP42680 631 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 CCZ1BP86790 482 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 CCZ1P86791 482 aaPredicted RBP22.6■■□□□ 1.21
PTPN11-202ENST00000392597 AP3B2Q13367 1082 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 DPF2Q92785 391 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 GTPBP4Q9BZE4 634 aaKnown RBP22.6■■□□□ 1.21
PTPN11-202ENST00000392597 TMX2Q9Y320 296 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 SLC37A4O43826 429 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 TDP2O95551 362 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 SKILP12757 684 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 PLCG1P19174 1290 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 ARID5BQ14865 1188 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 TNIP1Q15025 636 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 CALML4Q96GE6 196 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 VEZTQ9HBM0 779 aa22.6■■□□□ 1.21
PTPN11-202ENST00000392597 A0A1W2PRG0 241 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 TMEM232C9JQI7 657 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 USP11P51784 963 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 TRAF1Q13077 416 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 FBXO11Q86XK2 927 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 MMTAG2Q9BU76 263 aaKnown RBP22.59■■□□□ 1.21
PTPN11-202ENST00000392597 GOPCQ9HD26 462 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 RWDD2AQ9UIY3 292 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 ZBTB21Q9ULJ3 1066 aa22.59■■□□□ 1.21
PTPN11-202ENST00000392597 SFPQP23246 707 aaKnown RBP eCLIP22.58■■□□□ 1.21
PTPN11-202ENST00000392597 TXKP42681 527 aa22.58■■□□□ 1.21
PTPN11-202ENST00000392597 MAP3K10Q02779 954 aa22.58■■□□□ 1.21
PTPN11-202ENST00000392597 CDKAL1Q5VV42 579 aa22.58■■□□□ 1.21
PTPN11-202ENST00000392597 KLHL10Q6JEL2 608 aa22.58■■□□□ 1.21
PTPN11-202ENST00000392597 MOXD1Q6UVY6 613 aa22.58■■□□□ 1.21
PTPN11-202ENST00000392597 STK17AQ9UEE5 414 aa22.58■■□□□ 1.21
PTPN11-202ENST00000392597 LRWD1Q9UFC0 647 aa22.58■■□□□ 1.21
PTPN11-202ENST00000392597 DDX25Q9UHL0 483 aaKnown RBP22.58■■□□□ 1.21
PTPN11-202ENST00000392597 NRDCO43847 1150 aa22.58■■□□□ 1.2
PTPN11-202ENST00000392597 AMPD3Q01432 767 aa22.58■■□□□ 1.2
PTPN11-202ENST00000392597 DNTTIP2Q5QJE6 756 aaKnown RBP22.58■■□□□ 1.2
PTPN11-202ENST00000392597 NUP88Q99567 741 aaPredicted RBP22.58■■□□□ 1.2
PTPN11-202ENST00000392597 KCND1Q9NSA2 647 aa22.58■■□□□ 1.2
PTPN11-202ENST00000392597 SAMSN1Q9NSI8 373 aaKnown RBP22.58■■□□□ 1.2
PTPN11-202ENST00000392597 INTS13Q9NVM9 706 aa22.58■■□□□ 1.2
PTPN11-202ENST00000392597 RHOBTB3O94955 611 aa22.57■■□□□ 1.2
PTPN11-202ENST00000392597 RPS12P25398 132 aaKnown RBP22.57■■□□□ 1.2
PTPN11-202ENST00000392597 IKQ13123 557 aaPredicted RBP22.57■■□□□ 1.2
PTPN11-202ENST00000392597 PAK1Q13153 545 aa22.57■■□□□ 1.2
PTPN11-202ENST00000392597 ARMCX5Q6P1M9 558 aa22.57■■□□□ 1.2
PTPN11-202ENST00000392597 SMYD4Q8IYR2 804 aaPredicted RBP22.57■■□□□ 1.2
PTPN11-202ENST00000392597 CTAGE1Q96RT6 745 aa22.57■■□□□ 1.2
PTPN11-202ENST00000392597 C7orf25Q9BPX7 421 aa22.57■■□□□ 1.2
PTPN11-202ENST00000392597 MYOZ2Q9NPC6 264 aa22.57■■□□□ 1.2
PTPN11-202ENST00000392597 PGAP2Q9UHJ9 254 aa22.57■■□□□ 1.2
PTPN11-202ENST00000392597 R3HCC1Q9Y3T6 440 aaKnown RBP22.57■■□□□ 1.2
PTPN11-202ENST00000392597 CYP3A7-CYP3A51PA0A087WV96 503 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 WNT10BO00744 389 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 KLRC4O43908 158 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 CYP3A7P24462 503 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 KCNJ6P48051 423 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 ZNF280AP59817 542 aaPredicted RBP22.56■■□□□ 1.2
PTPN11-202ENST00000392597 LRRC15Q8TF66 581 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 CCDC47Q96A33 483 aaKnown RBP22.56■■□□□ 1.2
PTPN11-202ENST00000392597 TMEM39BQ9GZU3 492 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 SH2D4AQ9H788 454 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 CTNND2Q9UQB3 1225 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 ZNF541Q9H0D2 1346 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 A0A1B0GTH6 734 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 MEIS2O14770 477 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 FOSP01100 380 aaPredicted RBP22.56■■□□□ 1.2
PTPN11-202ENST00000392597 STAT2P52630 851 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 MBOAT7Q96N66 472 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 ANO3Q9BYT9 981 aa22.56■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L15C9J2P7 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L13C9JLJ4 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L11C9JVI0 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L18D6R9N7 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L22D6RA61 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L17D6RBQ6 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L19D6RCP7 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L20D6RJB6 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 SLC26A4O43511 780 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 PLA2G6O60733 806 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L24Q0WX57 530 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 KMT5BQ4FZB7 885 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 USP17L6PQ6QN14 398 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 GPC2Q8N158 579 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 PLIN2Q99541 437 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 TRIM9Q9C026 710 aa22.55■■□□□ 1.2
PTPN11-202ENST00000392597 CAP2P40123 477 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 ECE1P42892 770 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 STX17P56962 302 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 NR1I3Q14994 352 aa22.54■■□□□ 1.2
PTPN11-202ENST00000392597 APTXQ7Z2E3 356 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms