RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 HSPA4P34932 840 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 GNAQP50148 359 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 EXOSC10Q01780 885 aaKnown RBP13.74□□□□□ -0.21
RFC4-202ENST00000392481 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 LENG1Q96BZ8 264 aaPredicted RBP13.74□□□□□ -0.21
RFC4-202ENST00000392481 MPHOSPH6Q99547 160 aaKnown RBP13.74□□□□□ -0.21
RFC4-202ENST00000392481 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 SPZ1Q9BXG8 430 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 LRRC2Q9BYS8 371 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 SLC12A7Q9Y666 1083 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 SYNRGQ9UMZ2 1314 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 PNMA6FA0A0J9YX94 578 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 B4DLN1 442 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 PPP1R11O60927 126 aaPredicted RBP13.73□□□□□ -0.21
RFC4-202ENST00000392481 ADAMTS4O75173 837 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
RFC4-202ENST00000392481 TNFAIP2Q03169 654 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 LRRC26Q2I0M4 334 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 HOMER1Q86YM7 354 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 TBC1D5Q92609 795 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 PIGSQ96S52 555 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 TSEN34Q9BSV6 310 aaKnown RBP13.73□□□□□ -0.21
RFC4-202ENST00000392481 PHF24Q9UPV7 400 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 DDX49Q9Y6V7 483 aaKnown RBP13.73□□□□□ -0.21
RFC4-202ENST00000392481 ADCY6O43306 1168 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 EDNRBP24530 442 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 ADCYAP1R1P41586 468 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 GHRHRQ02643 423 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 IQSEC1Q6DN90 963 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 TAPT1Q6NXT6 567 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 C7orf61Q8IZ16 206 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 SAMD3Q8N6K7 520 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 KLHDC9Q8NEP7 349 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 SYTL5Q8TDW5 730 aaPredicted RBP13.73□□□□□ -0.21
RFC4-202ENST00000392481 UPF3AQ9H1J1 476 aaKnown RBP13.73□□□□□ -0.21
RFC4-202ENST00000392481 SPC25Q9HBM1 224 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 MAP3K20Q9NYL2 800 aaKnown RBP13.73□□□□□ -0.21
RFC4-202ENST00000392481 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
RFC4-202ENST00000392481 LRRC37A2A6NM11 1700 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 OPLAHO14841 1288 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 CST5P28325 142 aaPredicted RBP13.72□□□□□ -0.21
RFC4-202ENST00000392481 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
RFC4-202ENST00000392481 GJA9P57773 515 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 NKX3-2P78367 333 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 PDE4DQ08499 809 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
RFC4-202ENST00000392481 EEPD1Q7L9B9 569 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 FBXO16Q8IX29 292 aaPredicted RBP13.72□□□□□ -0.21
RFC4-202ENST00000392481 FANCBQ8NB91 859 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 NSUN6Q8TEA1 469 aaKnown RBP13.72□□□□□ -0.21
RFC4-202ENST00000392481 RRP36Q96EU6 259 aaKnown RBP13.72□□□□□ -0.21
RFC4-202ENST00000392481 TCEANC2Q96MN5 208 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 PDGFCQ9NRA1 345 aa13.72□□□□□ -0.21
RFC4-202ENST00000392481 GNEQ9Y223 722 aaKnown RBP13.72□□□□□ -0.21
RFC4-202ENST00000392481 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.22
RFC4-202ENST00000392481 MOXD2PA6NHM9 499 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 CFBP00751 764 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 C6orf222P0C671 652 aaPredicted RBP13.71□□□□□ -0.22
RFC4-202ENST00000392481 RXRAP19793 462 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 HSD17B4P51659 736 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 SNX17Q15036 470 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 CCSAPQ6IQ19 270 aaPredicted RBP13.71□□□□□ -0.22
RFC4-202ENST00000392481 APOA5Q6Q788 366 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 SLC39A5Q6ZMH5 540 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 SRBD1Q8N5C6 995 aaKnown RBP13.71□□□□□ -0.22
RFC4-202ENST00000392481 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.22
RFC4-202ENST00000392481 FERMT2Q96AC1 680 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 JAKMIP1Q96N16 626 aaKnown RBP13.71□□□□□ -0.22
RFC4-202ENST00000392481 TAAR1Q96RJ0 339 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 IWS1Q96ST2 819 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 RMDN3Q96TC7 470 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 COL20A1Q9P218 1284 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 Q9Y3F1 56 aa13.71□□□□□ -0.22
RFC4-202ENST00000392481 A0A1W2PQ45 241 aaPredicted RBP13.7□□□□□ -0.22
RFC4-202ENST00000392481 A0A1W2PQY0 241 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 RBM47A0AV96 593 aaKnown RBP13.7□□□□□ -0.22
RFC4-202ENST00000392481 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 SMPD1P17405 629 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 ACLYP53396 1101 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 KCNA10Q16322 511 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 GNASQ5JWF2 1037 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 BLOC1S2Q6QNY1 142 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 AP5M1Q9H0R1 490 aa13.7□□□□□ -0.22
RFC4-202ENST00000392481 SEC63Q9UGP8 760 aaKnown RBP13.7□□□□□ -0.22
RFC4-202ENST00000392481 MYADML2A6NDP7 307 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
RFC4-202ENST00000392481 CTAGE5O15320 804 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 ZBTB43O43298 467 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 PSMA5P28066 241 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 RCAN1P53805 252 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms