RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 KRT24Q2M2I5 525 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 KLHL40Q2TBA0 621 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 HSP90B2PQ58FF3 399 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 HGSNATQ68CP4 663 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 MMS22LQ6ZRQ5 1243 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 UNC5CLQ8IV45 518 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 C10orf67Q8IYJ2 551 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 RPUSD2Q8IZ73 545 aaKnown RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 SHISA5Q8N114 240 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 TMEM57Q8N5G2 664 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 CCDC191Q8NCU4 936 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 GOLGA5Q8TBA6 731 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 DDX54Q8TDD1 881 aaKnown RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 DNAAF4Q8WXU2 420 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ARHGAP45Q92619 1136 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 SYAP1Q96A49 352 aaPredicted RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 DDX11Q96FC9 970 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 PDLIM2Q96JY6 352 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 HHIPQ96QV1 700 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 POP1Q99575 1024 aaKnown RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 SH3GL3Q99963 347 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 TEX13AQ9BXU3 409 aaPredicted RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 UBA5Q9GZZ9 404 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 LRRC4CQ9HCJ2 640 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ARGLU1Q9NWB6 273 aaPredicted RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ETAA1Q9NY74 926 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 GOLGA6AQ9NYA3 693 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ABI2Q9NYB9 513 aaPredicted RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 SMC3Q9UQE7 1217 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 TNNQ9UQP3 1299 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 FNDC3AQ9Y2H6 1198 aaKnown RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 BCL9LQ86UU0 1499 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 TCHHQ07283 1943 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 AKAP11Q9UKA4 1901 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 SPATA31A1Q5TZJ5 1347 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 SPATA31A5Q5VU36 1347 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 SPATA31A7Q8IWB4 1347 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 SMTNL1A8MU46 457 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ERVV-2B6SEH9 535 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 KIF2AO00139 706 aaPredicted RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 EXOC5O00471 708 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CYP26A1O43174 497 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CTIFO43310 598 aaKnown RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 KCNQ3O43525 872 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 RLBP1P12271 317 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 DRD2P14416 443 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ATP2B4P23634 1241 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 PAX7P23759 505 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 SSFA2P28290 1259 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 HSPA1LP34931 641 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 NF2P35240 595 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ARL4DP49703 201 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 USP11P51784 963 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 HNRNPH2P55795 449 aaKnown RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 GSCP56915 257 aaPredicted RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 RWDD2BP57060 319 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 EIF4A1P60842 406 aaKnown RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 NOLC1Q14978 699 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CDC37Q16543 378 aaPredicted RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 MAP9Q49MG5 647 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 WDR78Q5VTH9 848 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ZNF790Q6PG37 636 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 SLC4A10Q6U841 1118 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 GBP6Q6ZN66 633 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 KRBA2Q6ZNG9 492 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ZNF438Q7Z4V0 828 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 KIAA1328Q86T90 577 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 SRLQ86TD4 932 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ERC1Q8IUD2 1116 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 RNF214Q8ND24 703 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ACRBPQ8NEB7 543 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CCDC112Q8NEF3 446 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 FLCNQ8NFG4 579 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 KIF18AQ8NI77 898 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CLP1Q92989 425 aaKnown RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 ASIC4Q96FT7 647 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 RMDN2Q96LZ7 410 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 TMX1Q9H3N1 280 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 VEZTQ9HBM0 779 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 IRAK4Q9NWZ3 460 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CHCHD3Q9NX63 227 aaKnown RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 TMOD3Q9NYL9 352 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 TMEM63CQ9P1W3 806 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CHPF2Q9P2E5 772 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CTNNA3Q9UI47 895 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 FRMD4BQ9Y2L6 1034 aa3.03□□□□□ -1.92
TRAV41-201ENST00000390468 LRRFIP2Q9Y608 721 aaKnown RBP3.03□□□□□ -1.92
TRAV41-201ENST00000390468 CDK5RAP2Q96SN8 1893 aa3.03□□□□□ -1.93
TRAV41-201ENST00000390468 DOCK2Q92608 1830 aa3.03□□□□□ -1.93
TRAV41-201ENST00000390468 ATRNO75882 1429 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 ATP10DQ9P241 1426 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 HEG1Q9ULI3 1381 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 AFF2P51816 1311 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 KDM2BQ8NHM5 1336 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 MYH2Q9UKX2 1941 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 MYH15Q9Y2K3 1946 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 A0A1B0GUA9 196 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 FAM95CA0A1B0GW59 222 aa3.02□□□□□ -1.93
TRAV41-201ENST00000390468 TNFRSF10BO14763 440 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms