RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 ZEB2O60315 1214 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 ICAM1P05362 532 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 CTDSPL2Q05D32 466 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 CCDC85BQ15834 202 aaPredicted RBP11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 PPP4R3BQ5MIZ7 849 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 NSMFQ6X4W1 530 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 GBF1Q92538 1859 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 ASB2Q96Q27 587 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 ALDH8A1Q9H2A2 487 aaPredicted RBP11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 RANBP17Q9H2T7 1088 aaKnown RBP11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 SLC28A3Q9HAS3 691 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 CCPG1Q9ULG6 757 aa11.05□□□□□ -0.64
TRBV3-1-201ENST00000390387 MYO9BQ13459 2157 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 ERC2O15083 957 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 IGFBP4P22692 258 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 RABGGTBP53611 331 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 BAATQ14032 418 aaPredicted RBP11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 DUSP28Q4G0W2 176 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 VPS53Q5VIR6 699 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 KIAA1211Q6ZU35 1233 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 SCLYQ96I15 445 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 TRMT13Q9NUP7 481 aaKnown RBP11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 ANAPC4Q9UJX5 808 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 SALL3Q9BXA9 1300 aa11.04□□□□□ -0.64
TRBV3-1-201ENST00000390387 NFIBO00712 420 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 RANBP6O60518 1105 aaKnown RBP11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 FGRP09769 529 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 MYOGP15173 224 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 SLC16A2P36021 539 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 ALDH5A1P51649 535 aaPredicted RBP11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 CCDC96Q2M329 555 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 BTNL9Q6UXG8 535 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 ADAMTS19Q8TE59 1207 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 DCAF4Q8WV16 495 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 ADD3Q9UEY8 706 aaKnown RBP11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 PCDHB15Q9Y5E8 787 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 SLC4A7Q9Y6M7 1214 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 TNKSO95271 1327 aa11.03□□□□□ -0.64
TRBV3-1-201ENST00000390387 LOC102724159A0A0B4J2E5 919 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 RBM47A0AV96 593 aaKnown RBP11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 ZBBXA8MT70 800 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 ORC4O43929 436 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 CYP2C9P11712 490 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 MX1P20591 662 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 COL9A1P20849 921 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 MRPS5P82675 430 aaKnown RBP11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 PURAQ00577 322 aaKnown RBP11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 TTLL4Q14679 1199 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 PWP2Q15269 919 aaKnown RBP11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 SYDE2Q5VT97 1194 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 UHRF1Q96T88 793 aaPredicted RBP11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 PCDHA11Q9Y5I1 949 aa11.02□□□□□ -0.65
TRBV3-1-201ENST00000390387 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 PFKMP08237 780 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 MYL3P08590 195 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 SUPT20HL2P0C7V6 817 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 ATP2A2P16615 1042 aaKnown RBP11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 CPT1AP50416 773 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 ALX1Q15699 326 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 SLC30A10Q6XR72 485 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 CLEC4DQ8WXI8 215 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 TMEM47Q9BQJ4 181 aa11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
TRBV3-1-201ENST00000390387 SCN10AQ9Y5Y9 1956 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 CA3P07451 260 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 PDHBP11177 359 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 TOP1P11387 765 aaKnown RBP11□□□□□ -0.65
TRBV3-1-201ENST00000390387 EDNRBP24530 442 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 CALML3P27482 149 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 DEFB128Q7Z7B8 93 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 MICALL1Q8N3F8 863 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 PPP1R13LQ8WUF5 828 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 RAPGEFL1Q9UHV5 662 aa11□□□□□ -0.65
TRBV3-1-201ENST00000390387 A6NJR5 290 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 RFXAPO00287 272 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 FGAP02671 866 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 BMP1P13497 986 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 POU3F3P20264 500 aaPredicted RBP10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 RFC2P35250 354 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 RPS6P62753 249 aaKnown RBP10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 TFF2Q03403 129 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 FAM47CQ5HY64 1035 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 RRP12Q5JTH9 1297 aaKnown RBP10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 RNF207Q6ZRF8 634 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
TRBV3-1-201ENST00000390387 COPS5Q92905 334 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms