RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 P2RX5Q93086 422 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 SEC31BQ9NQW1 1179 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 BIN2Q9UBW5 565 aaPredicted RBP15.7■□□□□ 0.1
RTF1-201ENST00000389629 SUFUQ9UMX1 484 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 NBPF26B4DH59 902 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 ADAMTS2O95450 1211 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 PRCPP42785 496 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 IRAK1P51617 712 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 NBPF10Q6P3W6 841 aaKnown RBP15.7■□□□□ 0.1
RTF1-201ENST00000389629 NBPF15Q8N660 670 aa15.7■□□□□ 0.1
RTF1-201ENST00000389629 SPATS2LQ9NUQ6 558 aaKnown RBP15.7■□□□□ 0.1
RTF1-201ENST00000389629 PRPF3O43395 683 aaKnown RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 CALCRLQ16602 461 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 GSTA5Q7RTV2 222 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 TEX11Q8IYF3 940 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 ERMNQ8TAM6 284 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 MLXIPQ9HAP2 919 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 SMCO2A6NFE2 343 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 BACH1O14867 736 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 DDAH1O94760 285 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 HIBADHP31937 336 aaKnown RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 TBC1D1Q86TI0 1168 aaPredicted RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 ARHGEF2Q92974 986 aaKnown RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 PLVAPQ9BX97 442 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 ADD3Q9UEY8 706 aaKnown RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 HIP1RO75146 1068 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 TFRCP02786 760 aaKnown RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 ABCB4P21439 1286 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 TRAPPC10P48553 1259 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 EIF6P56537 245 aaKnown RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 PACS2Q86VP3 889 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 GPCPD1Q9NPB8 672 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 L1RE1Q9UN81 338 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 TFR2Q9UP52 801 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 ATP8A1Q9Y2Q0 1164 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 CPDO75976 1380 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 C6orf229H3BNL8 230 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 CETN3O15182 167 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 OR52Z1P0C646 297 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 GBP1P32455 592 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 VWA3BQ502W6 1294 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 NFRKBQ6P4R8 1299 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 RASGRP2Q7LDG7 609 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 SGMS1Q86VZ5 419 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 SMCR8Q8TEV9 937 aaPredicted RBP15.69■□□□□ 0.1
RTF1-201ENST00000389629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.69■□□□□ 0.14e-7■■■■■ 107.5
RTF1-201ENST00000389629 PCDHA13Q9Y5I0 950 aa15.69■□□□□ 0.1
RTF1-201ENST00000389629 MYO1FO00160 1098 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 HNRNPH1P31943 449 aaKnown RBP15.68■□□□□ 0.1
RTF1-201ENST00000389629 NLRP10Q86W26 655 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 PPFIBP2Q8ND30 876 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 HPCAL4Q9UM19 191 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.68■□□□□ 0.1
RTF1-201ENST00000389629 ATP6V0A2Q9Y487 856 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 TSPOAP1O95153 1857 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 LRRIQ3A6PVS8 624 aaPredicted RBP15.68■□□□□ 0.1
RTF1-201ENST00000389629 NCK2O43639 380 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 ZRANB2O95218 330 aaKnown RBP eCLIP15.68■□□□□ 0.1
RTF1-201ENST00000389629 ALDH3A1P30838 453 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 TAOK1Q7L7X3 1001 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 IQCDQ96DY2 449 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
RTF1-201ENST00000389629 MTUS1Q9ULD2 1270 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 PTPAQ15257 358 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 RETREG2Q8NC44 543 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 PLAAQ9Y263 795 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 EIF4E1BA6NMX2 242 aaKnown RBP15.68■□□□□ 0.1
RTF1-201ENST00000389629 KIF11P52732 1056 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 ZNF131P52739 623 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 CHRNDQ07001 517 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 CCDC38Q502W7 563 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 NAP1L3Q99457 506 aaPredicted RBP15.68■□□□□ 0.1
RTF1-201ENST00000389629 LRRC1Q9BTT6 524 aa15.68■□□□□ 0.1
RTF1-201ENST00000389629 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
RTF1-201ENST00000389629 IGDCC4Q8TDY8 1250 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 KLC4Q9NSK0 619 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 INTS9Q9NV88 658 aaKnown RBP15.67■□□□□ 0.1
RTF1-201ENST00000389629 SPOPO43791 374 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 FLOT1O75955 427 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 SESN3P58005 492 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 PLS1Q14651 629 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 PARP10Q53GL7 1025 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 SEL1L2Q5TEA6 688 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 CCDC105Q8IYK2 499 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 REXO1Q8N1G1 1221 aaKnown RBP15.67■□□□□ 0.1
RTF1-201ENST00000389629 TRIM6Q9C030 488 aaPredicted RBP15.67■□□□□ 0.1
RTF1-201ENST00000389629 TSNAXIP1Q2TAA8 658 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 SLF2Q8IX21 1173 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 U2AF1L4Q8WU68 220 aaKnown RBP15.67■□□□□ 0.1
RTF1-201ENST00000389629 STMN2Q93045 179 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 ACTR5Q9H9F9 607 aaPredicted RBP15.67■□□□□ 0.1
RTF1-201ENST00000389629 GYPCP04921 128 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 DHX9Q08211 1270 aaKnown RBP15.67■□□□□ 0.1
RTF1-201ENST00000389629 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 CCDC24Q8N4L8 307 aa15.67■□□□□ 0.1
RTF1-201ENST00000389629 HNRNPLLQ8WVV9 542 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms