RNA–Protein interactions for RNA: ENST00000389231.9

USP5-202, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP5, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-202ENST00000389231 CCDC122Q5T0U0 273 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 TRAPPC11Q7Z392 1133 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 FAM71BQ8TC56 605 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 VAT1LQ9HCJ6 419 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
USP5-202ENST00000389231 HDAC6Q9UBN7 1215 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 TUBBP07437 444 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 GNA11P29992 359 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 ASIC1P78348 528 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 CCDC47Q96A33 483 aaKnown RBP13.41□□□□□ -0.26
USP5-202ENST00000389231 C6orf50Q9HD87 102 aa13.41□□□□□ -0.26
USP5-202ENST00000389231 NRAPQ86VF7 1730 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 LRRIQ3A6PVS8 624 aaPredicted RBP13.4□□□□□ -0.26
USP5-202ENST00000389231 BTDP43251 543 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 KRT83P78385 493 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 C16orf86Q6ZW13 317 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 ZNF804AQ7Z570 1209 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 NEK8Q86SG6 692 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 NEDD1Q8NHV4 660 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 CNOT6LQ96LI5 555 aaKnown RBP13.4□□□□□ -0.26
USP5-202ENST00000389231 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
USP5-202ENST00000389231 NUP58Q9BVL2 599 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 MYH8P13535 1937 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP5-202ENST00000389231 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 RETREG2Q8NC44 543 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 TBCKQ8TEA7 893 aa13.4□□□□□ -0.26
USP5-202ENST00000389231 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
USP5-202ENST00000389231 RCCD1A6NED2 376 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 ATP1A1P05023 1023 aaKnown RBP13.39□□□□□ -0.27
USP5-202ENST00000389231 ZBED6P86452 979 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 MIIPQ5JXC2 388 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 ZNF662Q6ZS27 426 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 LACRTQ9GZZ8 138 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 NHEJ1Q9H9Q4 299 aaPredicted RBP13.39□□□□□ -0.27
USP5-202ENST00000389231 ZNHIT6Q9NWK9 470 aaKnown RBP13.39□□□□□ -0.27
USP5-202ENST00000389231 LAMB1P07942 1786 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 MTIF2P46199 727 aaKnown RBP13.39□□□□□ -0.27
USP5-202ENST00000389231 AMPD3Q01432 767 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 CEP95Q96GE4 821 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 PIGSQ96S52 555 aa13.39□□□□□ -0.27
USP5-202ENST00000389231 NOC4LQ9BVI4 516 aaKnown RBP13.39□□□□□ -0.27
USP5-202ENST00000389231 BIN2Q9UBW5 565 aaPredicted RBP13.39□□□□□ -0.27
USP5-202ENST00000389231 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
USP5-202ENST00000389231 GPR75-ASB3A0A0A6YYF3 556 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 SRGAP2O75044 1071 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 CYLC1P35663 651 aaPredicted RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 PAPD7Q5XG87 772 aaKnown RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 FAM114A1Q8IWE2 563 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 GOLGA6L1Q8N7Z2 621 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 SAR1BQ9Y6B6 198 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 KRT86O43790 486 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 CCDC170Q8IYT3 715 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 KIAA0895Q8NCT3 520 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 PCMTD1Q96MG8 357 aaPredicted RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 SEMA6BQ9H3T3 888 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 CD209Q9NNX6 404 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 EIF3CLB5ME19 914 aaKnown RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 PPP1R2P41236 205 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 TXKP42681 527 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 WDR93Q6P2C0 686 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 C15orf52Q6ZUT6 534 aaKnown RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 ERGIC2Q96RQ1 377 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 EIF3CQ99613 913 aaKnown RBP13.38□□□□□ -0.27
USP5-202ENST00000389231 SLC39A2Q9NP94 309 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 MED4Q9NPJ6 270 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
USP5-202ENST00000389231 USP17L5A8MUK1 530 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 RFC4P35249 363 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 GPSM2P81274 684 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 CNNM4Q6P4Q7 775 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
USP5-202ENST00000389231 CALML4Q96GE6 196 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 RPS6KA5O75582 802 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 CYP27A1Q02318 531 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 SV2BQ7L1I2 683 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 CERS3Q8IU89 383 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 MTMR9Q96QG7 549 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 BLOC1S4Q9NUP1 217 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
USP5-202ENST00000389231 RNF40O75150 1001 aa13.36□□□□□ -0.27
USP5-202ENST00000389231 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms