RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 TGFB2P61812 414 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 GPATCH4Q5T3I0 446 aaKnown RBP11.47□□□□□ -0.57
LTN1-203ENST00000389195 KRT25Q7Z3Z0 450 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 CABP7Q86V35 215 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 TRPM4Q8TD43 1214 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 HAS1Q92839 578 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 CUL5Q93034 780 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 MEIS1O00470 390 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 PRR16Q569H4 304 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 DAGLBQ8NCG7 672 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 MKL1Q969V6 931 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 WNK4Q96J92 1243 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 C16orf45Q96MC5 204 aaPredicted RBP11.47□□□□□ -0.57
LTN1-203ENST00000389195 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 RIC8AQ9NPQ8 531 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 TBC1D7Q9P0N9 293 aa11.47□□□□□ -0.57
LTN1-203ENST00000389195 NPHP3-ACAD11A0A0J9YXS1 232 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 MYO1BO43795 1136 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 EPS15P42566 896 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 PRCPP42785 496 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 MCM6Q14566 821 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 SYDE2Q5VT97 1194 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 ARMCX5Q6P1M9 558 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 CCDC12Q8WUD4 166 aaPredicted RBP11.46□□□□□ -0.57
LTN1-203ENST00000389195 FEZ1Q99689 392 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 DEFB129Q9H1M3 183 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 DDX25Q9UHL0 483 aaKnown RBP11.46□□□□□ -0.57
LTN1-203ENST00000389195 MYH7BA7E2Y1 1941 aa11.46□□□□□ -0.57
LTN1-203ENST00000389195 FAM86B1E9PN63 330 aa11.46□□□□□ -0.58
LTN1-203ENST00000389195 FAM86B2P0C5J1 330 aa11.46□□□□□ -0.58
LTN1-203ENST00000389195 ADKP55263 362 aaKnown RBP11.46□□□□□ -0.58
LTN1-203ENST00000389195 ANGEL2Q5VTE6 544 aaKnown RBP11.46□□□□□ -0.58
LTN1-203ENST00000389195 LRRC8AQ8IWT6 810 aa11.46□□□□□ -0.58
LTN1-203ENST00000389195 UPF1Q92900 1129 aaKnown RBP eCLIP11.46□□□□□ -0.58
LTN1-203ENST00000389195 LRWD1Q9UFC0 647 aa11.46□□□□□ -0.58
LTN1-203ENST00000389195 ZBTB39O15060 712 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 CAP2P40123 477 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 LRRC41Q15345 812 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 KMT5BQ4FZB7 885 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 HS1BP3Q53T59 392 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 FBXO11Q86XK2 927 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 RGS22Q8NE09 1264 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 TEPSINQ96N21 525 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 ATRNL1Q5VV63 1379 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 IGSF3O75054 1194 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 DDNO94850 711 aaPredicted RBP11.45□□□□□ -0.58
LTN1-203ENST00000389195 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
LTN1-203ENST00000389195 SKILP12757 684 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 LONP1P36776 959 aaKnown RBP11.45□□□□□ -0.58
LTN1-203ENST00000389195 CYP4A11Q02928 519 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 NT5DC1Q5TFE4 455 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 KIAA1524Q8TCG1 905 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 MTMR9Q96QG7 549 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 TMX1Q9H3N1 280 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 SLC39A2Q9NP94 309 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 PGAP2Q9UHJ9 254 aa11.45□□□□□ -0.58
LTN1-203ENST00000389195 HOOK1Q9UJC3 728 aaKnown RBP11.45□□□□□ -0.58
LTN1-203ENST00000389195 E9PMD0 336 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 CHMP2AO43633 222 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 STAT2P52630 851 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 MRPL12P52815 198 aaKnown RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 STK4Q13043 487 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 ARL6IP4Q66PJ3 421 aaKnown RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 SARM1Q6SZW1 724 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 MTMR8Q96EF0 704 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 SH2D3AQ9BRG2 576 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 ANO3Q9BYT9 981 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 FHDC1Q9C0D6 1143 aaPredicted RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 PES1O00541 588 aaKnown RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 ZNF500O60304 480 aaPredicted RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 IDEP14735 1019 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 HIRAP54198 1017 aaPredicted RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 PSMC6P62333 389 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 GRB10Q13322 594 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 AGBL3Q8NEM8 1001 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 PNMA5Q96PV4 448 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 AMNQ9BXJ7 453 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 FGFBP2Q9BYJ0 223 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 VPS16Q9H269 839 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 SMTNL1A8MU46 457 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 SORBS3O60504 671 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 BMP15O95972 392 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 TXLNAP40222 546 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 MTMR2Q13614 643 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 GALNT17Q6IS24 598 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 SNX29Q8TEQ0 813 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 DCAF4Q8WV16 495 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 MRFAP1L1Q96HT8 127 aa11.44□□□□□ -0.58
LTN1-203ENST00000389195 HERC5Q9UII4 1024 aaKnown RBP11.44□□□□□ -0.58
LTN1-203ENST00000389195 RGPD3A6NKT7 1758 aaPredicted RBP11.43□□□□□ -0.58
LTN1-203ENST00000389195 RGPD4Q7Z3J3 1758 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms