RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 VTA1Q9NP79 307 aa26.76■■□□□ 1.87
VLDLR-201ENST00000382096 YBX2Q9Y2T7 364 aaKnown RBP26.76■■□□□ 1.87
VLDLR-201ENST00000382096 SCN5AQ14524 2016 aa26.76■■□□□ 1.87
VLDLR-201ENST00000382096 OTOP2Q7RTS6 562 aa26.75■■□□□ 1.87
VLDLR-201ENST00000382096 ASB2Q96Q27 587 aa26.75■■□□□ 1.87
VLDLR-201ENST00000382096 RWDD1Q9H446 243 aaPredicted RBP26.75■■□□□ 1.87
VLDLR-201ENST00000382096 SCN10AQ9Y5Y9 1956 aa26.75■■□□□ 1.87
VLDLR-201ENST00000382096 TANC1Q9C0D5 1861 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 NMT2O60551 498 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 FGAP02671 866 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 CCL23P55773 120 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 SNAP25P60880 206 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 EEPD1Q7L9B9 569 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 RASGRP2Q7LDG7 609 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 CCPG1Q9ULG6 757 aa26.74■■□□□ 1.87
VLDLR-201ENST00000382096 RANBP6O60518 1105 aaKnown RBP26.73■■□□□ 1.87
VLDLR-201ENST00000382096 ICAM1P05362 532 aa26.73■■□□□ 1.87
VLDLR-201ENST00000382096 PSMC6P62333 389 aa26.73■■□□□ 1.87
VLDLR-201ENST00000382096 TMEM63BQ5T3F8 832 aa26.73■■□□□ 1.87
VLDLR-201ENST00000382096 YTHDC1Q96MU7 727 aaKnown RBP26.73■■□□□ 1.87
VLDLR-201ENST00000382096 HSPD1P10809 573 aaKnown RBP26.72■■□□□ 1.87
VLDLR-201ENST00000382096 IGFBP4P22692 258 aa26.72■■□□□ 1.87
VLDLR-201ENST00000382096 DUSP28Q4G0W2 176 aa26.72■■□□□ 1.87
VLDLR-201ENST00000382096 NSMFQ6X4W1 530 aa26.72■■□□□ 1.87
VLDLR-201ENST00000382096 ZNF589Q86UQ0 364 aaPredicted RBP26.72■■□□□ 1.87
VLDLR-201ENST00000382096 RPUSD2Q8IZ73 545 aaKnown RBP26.72■■□□□ 1.87
VLDLR-201ENST00000382096 VWCEQ96DN2 955 aa26.72■■□□□ 1.87
VLDLR-201ENST00000382096 ALDH8A1Q9H2A2 487 aaPredicted RBP26.72■■□□□ 1.87
VLDLR-201ENST00000382096 OSBPL3Q9H4L5 887 aa26.72■■□□□ 1.87
VLDLR-201ENST00000382096 MRPS5P82675 430 aaKnown RBP26.71■■□□□ 1.87
VLDLR-201ENST00000382096 NMIQ13287 307 aaPredicted RBP26.71■■□□□ 1.87
VLDLR-201ENST00000382096 KIAA1211Q6ZU35 1233 aa26.71■■□□□ 1.87
VLDLR-201ENST00000382096 CHD1LQ86WJ1 897 aa26.71■■□□□ 1.87
VLDLR-201ENST00000382096 PURBQ96QR8 312 aaKnown RBP26.71■■□□□ 1.87
VLDLR-201ENST00000382096 RANBP17Q9H2T7 1088 aaKnown RBP26.71■■□□□ 1.87
VLDLR-201ENST00000382096 TCP11L1Q9NUJ3 509 aa26.71■■□□□ 1.87
VLDLR-201ENST00000382096 SLC4A7Q9Y6M7 1214 aa26.71■■□□□ 1.87
VLDLR-201ENST00000382096 LOC102724159A0A0B4J2E5 919 aa26.7■■□□□ 1.86
VLDLR-201ENST00000382096 NUCB1Q02818 461 aa26.7■■□□□ 1.86
VLDLR-201ENST00000382096 PWP2Q15269 919 aaKnown RBP26.7■■□□□ 1.86
VLDLR-201ENST00000382096 CCDC85BQ15834 202 aaPredicted RBP26.7■■□□□ 1.86
VLDLR-201ENST00000382096 ADAMTS19Q8TE59 1207 aa26.7■■□□□ 1.86
VLDLR-201ENST00000382096 DCAF4Q8WV16 495 aa26.7■■□□□ 1.86
VLDLR-201ENST00000382096 ADD3Q9UEY8 706 aaKnown RBP26.7■■□□□ 1.86
VLDLR-201ENST00000382096 PCDHA11Q9Y5I1 949 aa26.7■■□□□ 1.86
VLDLR-201ENST00000382096 CCDC171Q6TFL3 1326 aa26.69■■□□□ 1.86
VLDLR-201ENST00000382096 IGHDP01880 384 aa26.69■■□□□ 1.86
VLDLR-201ENST00000382096 ALDH5A1P51649 535 aaPredicted RBP26.69■■□□□ 1.86
VLDLR-201ENST00000382096 BTNL9Q6UXG8 535 aa26.69■■□□□ 1.86
VLDLR-201ENST00000382096 PLEKHM2Q8IWE5 1019 aa26.69■■□□□ 1.86
VLDLR-201ENST00000382096 SCLYQ96I15 445 aa26.69■■□□□ 1.86
VLDLR-201ENST00000382096 POLR3EQ9NVU0 708 aa26.69■■□□□ 1.86
VLDLR-201ENST00000382096 TCF20Q9UGU0 1960 aaKnown RBP26.68■■□□□ 1.86
VLDLR-201ENST00000382096 TRIM6-TRIM34B2RNG4 842 aa26.68■■□□□ 1.86
VLDLR-201ENST00000382096 PFKMP08237 780 aa26.68■■□□□ 1.86
VLDLR-201ENST00000382096 PCP11498 1178 aaKnown RBP26.68■■□□□ 1.86
VLDLR-201ENST00000382096 RABGGTBP53611 331 aa26.68■■□□□ 1.86
VLDLR-201ENST00000382096 CCDC96Q2M329 555 aa26.68■■□□□ 1.86
VLDLR-201ENST00000382096 PPP2R2DQ66LE6 453 aa26.68■■□□□ 1.86
VLDLR-201ENST00000382096 B4GALNT3Q6L9W6 998 aa26.68■■□□□ 1.86
VLDLR-201ENST00000382096 RBM47A0AV96 593 aaKnown RBP26.67■■□□□ 1.86
VLDLR-201ENST00000382096 SUPT20HL2P0C7V6 817 aa26.67■■□□□ 1.86
VLDLR-201ENST00000382096 PURAQ00577 322 aaKnown RBP26.67■■□□□ 1.86
VLDLR-201ENST00000382096 BAATQ14032 418 aaPredicted RBP26.67■■□□□ 1.86
VLDLR-201ENST00000382096 WDR11Q9BZH6 1224 aa26.67■■□□□ 1.86
VLDLR-201ENST00000382096 TRMT13Q9NUP7 481 aaKnown RBP26.67■■□□□ 1.86
VLDLR-201ENST00000382096 MTMR7Q9Y216 660 aa26.67■■□□□ 1.86
VLDLR-201ENST00000382096 TNKSO95271 1327 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 NFIBO00712 420 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 MYOGP15173 224 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 ATP2A2P16615 1042 aaKnown RBP26.66■■□□□ 1.86
VLDLR-201ENST00000382096 SDSP20132 328 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 COL9A1P20849 921 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 CPT1AP50416 773 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 EXOC6Q8TAG9 804 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 RILPL2Q969X0 211 aa26.66■■□□□ 1.86
VLDLR-201ENST00000382096 ZBBXA8MT70 800 aa26.65■■□□□ 1.86
VLDLR-201ENST00000382096 TOP1P11387 765 aaKnown RBP26.65■■□□□ 1.86
VLDLR-201ENST00000382096 SLC16A2P36021 539 aa26.65■■□□□ 1.86
VLDLR-201ENST00000382096 SYDE2Q5VT97 1194 aa26.65■■□□□ 1.86
VLDLR-201ENST00000382096 TTBK2Q6IQ55 1244 aa26.65■■□□□ 1.86
VLDLR-201ENST00000382096 UHRF1Q96T88 793 aaPredicted RBP26.65■■□□□ 1.86
VLDLR-201ENST00000382096 TMEM47Q9BQJ4 181 aa26.65■■□□□ 1.86
VLDLR-201ENST00000382096 PRRC2BQ5JSZ5 2229 aaKnown RBP26.65■■□□□ 1.86
VLDLR-201ENST00000382096 CYP2C9P11712 490 aa26.64■■□□□ 1.86
VLDLR-201ENST00000382096 MFAP1P55081 439 aaKnown RBP26.64■■□□□ 1.86
VLDLR-201ENST00000382096 TTLL4Q14679 1199 aa26.64■■□□□ 1.86
VLDLR-201ENST00000382096 RRP12Q5JTH9 1297 aaKnown RBP26.64■■□□□ 1.86
VLDLR-201ENST00000382096 TOMM22Q9NS69 142 aa26.64■■□□□ 1.86
VLDLR-201ENST00000382096 PTPRSQ13332 1948 aa26.64■■□□□ 1.86
VLDLR-201ENST00000382096 TRIP12Q14669 1992 aaPredicted RBP26.64■■□□□ 1.85
VLDLR-201ENST00000382096 TET1Q8NFU7 2136 aa26.63■■□□□ 1.85
VLDLR-201ENST00000382096 HAND2P61296 217 aa26.63■■□□□ 1.85
VLDLR-201ENST00000382096 SLC30A10Q6XR72 485 aa26.63■■□□□ 1.85
VLDLR-201ENST00000382096 TBC1D10CQ8IV04 446 aa26.63■■□□□ 1.85
VLDLR-201ENST00000382096 IL27Q8NEV9 243 aa26.63■■□□□ 1.85
VLDLR-201ENST00000382096 TTC14Q96N46 770 aa26.63■■□□□ 1.85
VLDLR-201ENST00000382096 MTG1Q9BT17 334 aaPredicted RBP26.63■■□□□ 1.85
VLDLR-201ENST00000382096 TSPYL2Q9H2G4 693 aaPredicted RBP26.63■■□□□ 1.85
VLDLR-201ENST00000382096 PTPDC1A2A3K4 754 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms