RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 SPATA1Q5VX52 437 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 GJA10Q969M2 543 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 ZBTB24O43167 697 aaPredicted RBP16.35■□□□□ 0.21
SNPH-202ENST00000381873 RPN1P04843 607 aaKnown RBP16.35■□□□□ 0.21
SNPH-202ENST00000381873 H2AFZP0C0S5 128 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 USP14P54578 494 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 SLC12A2P55011 1212 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 SCRN1Q12765 414 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 LONRF2Q1L5Z9 754 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 LRCH2Q5VUJ6 765 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 H2AFVQ71UI9 128 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 MAGEF1Q9HAY2 307 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 GOLGA6BA6NDN3 693 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 CCDC160A6NGH7 325 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 KCNQ4P56696 695 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 PPP2R5EQ16537 467 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 DHX36Q9H2U1 1008 aaKnown RBP16.35■□□□□ 0.21
SNPH-202ENST00000381873 KIAA1024Q9UPX6 916 aa16.35■□□□□ 0.21
SNPH-202ENST00000381873 BIRC2Q13490 618 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 B4GALNT4Q76KP1 1039 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 SND1Q7KZF4 910 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNPH-202ENST00000381873 FAM193BQ96PV7 902 aaPredicted RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 JPH2Q9BR39 696 aaPredicted RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 AFG3L2Q9Y4W6 797 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 LAD1O00515 517 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 ADD2P35612 726 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 MTMR3Q13615 1198 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 BSPRYQ5W0U4 402 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 SRGAP1Q7Z6B7 1085 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 SYMPKQ92797 1274 aaKnown RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 H7C1W4 665 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 DYNLL1P63167 89 aaKnown RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 PPP2R5AQ15172 486 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 SCYL2Q6P3W7 929 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 SDCCAG8Q86SQ7 713 aaPredicted RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 STMN2Q93045 179 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 LRRC7Q96NW7 1537 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 MED10Q9BTT4 135 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 CUEDC2Q9H467 287 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 PARP2Q9UGN5 583 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 ARHGEF6Q15052 776 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 ADCK5Q3MIX3 580 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 C17orf53Q8N3J3 647 aaPredicted RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 POMGNT1Q8WZA1 660 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 RTEL1Q9NZ71 1219 aa16.34■□□□□ 0.21
SNPH-202ENST00000381873 ADD3Q9UEY8 706 aaKnown RBP16.34■□□□□ 0.21
SNPH-202ENST00000381873 PLEKHG2Q9H7P9 1386 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 A0A1W2PQ27 194 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 A0A1W2PQ64 194 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 A0A1W2PQD8 194 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 SLC39A14Q15043 492 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 KRT71Q3SY84 523 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 NBPF3Q9H094 633 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.21
SNPH-202ENST00000381873 PRAMEF22A3QJZ6 481 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 GCFC2P16383 781 aaKnown RBP16.33■□□□□ 0.2
SNPH-202ENST00000381873 RIMS1Q86UR5 1692 aaKnown RBP16.33■□□□□ 0.2
SNPH-202ENST00000381873 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 IGBP1P78318 339 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 SARNPP82979 210 aaKnown RBP16.33■□□□□ 0.2
SNPH-202ENST00000381873 CTAGE3PQ8IX95 158 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 RSAD2Q8WXG1 361 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 PCDHA5Q9Y5H7 936 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 HNRNPDLO14979 420 aaKnown RBP16.33■□□□□ 0.2
SNPH-202ENST00000381873 CIB2O75838 187 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 BMP3P12645 472 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 POLR2FP61218 127 aaKnown RBP16.33■□□□□ 0.2
SNPH-202ENST00000381873 ELF2Q15723 593 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 TRIM50Q86XT4 487 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 ATP2A3Q93084 1043 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 GSDMAQ96QA5 445 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 RIC8AQ9NPQ8 531 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 RAB20Q9NX57 234 aa16.33■□□□□ 0.2
SNPH-202ENST00000381873 PDE6CP51160 858 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 NDUFA8P51970 172 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 CCDC93Q567U6 631 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 ZMYND15Q9H091 742 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 VPS37BQ9H9H4 285 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 RAD17O75943 681 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 ABL1P00519 1130 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 PPFIA1Q13136 1202 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 TFDP1Q14186 410 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 VSIG1Q86XK7 387 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 ZNF710Q8N1W2 664 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 NUB1Q9Y5A7 615 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 RPAP1Q9BWH6 1393 aaPredicted RBP16.32■□□□□ 0.2
SNPH-202ENST00000381873 RNF8O76064 485 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 PPP2R5CQ13362 524 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 KRT81Q14533 505 aa16.32■□□□□ 0.2
SNPH-202ENST00000381873 PDZD4Q76G19 769 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms