RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 CACNB2Q08289 660 aaPredicted RBP23.07■■□□□ 1.28
CDPF1-202ENST00000381037 MTFR1Q15390 333 aa23.07■■□□□ 1.28
CDPF1-202ENST00000381037 PKN1Q16512 942 aa23.07■■□□□ 1.28
CDPF1-202ENST00000381037 MSL3Q8N5Y2 521 aaKnown RBP23.07■■□□□ 1.28
CDPF1-202ENST00000381037 IL27Q8NEV9 243 aa23.07■■□□□ 1.28
CDPF1-202ENST00000381037 RNF26Q9BY78 433 aaPredicted RBP23.07■■□□□ 1.28
CDPF1-202ENST00000381037 SLKQ9H2G2 1235 aaPredicted RBP23.07■■□□□ 1.28
CDPF1-202ENST00000381037 COL20A1Q9P218 1284 aa23.07■■□□□ 1.28
CDPF1-202ENST00000381037 LCTP09848 1927 aa23.06■■□□□ 1.28
CDPF1-202ENST00000381037 TYW1BQ6NUM6 668 aa23.06■■□□□ 1.28
CDPF1-202ENST00000381037 NOL8Q76FK4 1167 aaKnown RBP23.06■■□□□ 1.28
CDPF1-202ENST00000381037 SYTL5Q8TDW5 730 aaPredicted RBP23.06■■□□□ 1.28
CDPF1-202ENST00000381037 MAP3K20Q9NYL2 800 aaKnown RBP23.06■■□□□ 1.28
CDPF1-202ENST00000381037 BIN2Q9UBW5 565 aaPredicted RBP23.06■■□□□ 1.28
CDPF1-202ENST00000381037 LIMCH1Q9UPQ0 1083 aa23.06■■□□□ 1.28
CDPF1-202ENST00000381037 PRKAR2AP13861 404 aaKnown RBP23.05■■□□□ 1.28
CDPF1-202ENST00000381037 UBXN2AP68543 259 aa23.05■■□□□ 1.28
CDPF1-202ENST00000381037 PFKFB3Q16875 520 aaPredicted RBP23.05■■□□□ 1.28
CDPF1-202ENST00000381037 MFSD14CQ5VZR4 134 aa23.05■■□□□ 1.28
CDPF1-202ENST00000381037 WWC2Q6AWC2 1192 aa23.05■■□□□ 1.28
CDPF1-202ENST00000381037 SAMD3Q8N6K7 520 aa23.05■■□□□ 1.28
CDPF1-202ENST00000381037 PPFIA3O75145 1194 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 SNAI1O95863 264 aaPredicted RBP23.04■■□□□ 1.28
CDPF1-202ENST00000381037 CALML3P27482 149 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 NECAB1Q8N987 351 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 GPKOWQ92917 476 aaPredicted RBP eCLIP23.04■■□□□ 1.28
CDPF1-202ENST00000381037 GTF3C6Q969F1 213 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 RBM27Q9P2N5 1060 aaKnown RBP23.04■■□□□ 1.28
CDPF1-202ENST00000381037 SYNGAP1Q96PV0 1343 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 CTDNEP1O95476 244 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 CFBP00751 764 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 ST3GAL1Q11201 340 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 HEATR3Q7Z4Q2 680 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 TRPV1Q8NER1 839 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 MORC4Q8TE76 937 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 UNC93B1Q9H1C4 597 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 BARHL2Q9NY43 387 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 RPTORQ8N122 1335 aa23.04■■□□□ 1.28
CDPF1-202ENST00000381037 hCG_1984214I3L0E3 225 aa23.03■■□□□ 1.28
CDPF1-202ENST00000381037 STXBP3O00186 592 aa23.03■■□□□ 1.28
CDPF1-202ENST00000381037 CPLX1O14810 134 aa23.03■■□□□ 1.28
CDPF1-202ENST00000381037 CYBAP13498 195 aa23.03■■□□□ 1.28
CDPF1-202ENST00000381037 CCL5P13501 91 aa23.03■■□□□ 1.28
CDPF1-202ENST00000381037 SCG2P13521 617 aa23.03■■□□□ 1.28
CDPF1-202ENST00000381037 ZNF713Q8N859 430 aaPredicted RBP23.03■■□□□ 1.28
CDPF1-202ENST00000381037 DNERQ8NFT8 737 aa23.03■■□□□ 1.28
CDPF1-202ENST00000381037 PAK6Q9NQU5 681 aaPredicted RBP23.03■■□□□ 1.28
CDPF1-202ENST00000381037 LOC102724159A0A0B4J2E5 919 aa23.02■■□□□ 1.28
CDPF1-202ENST00000381037 MEIS2O14770 477 aa23.02■■□□□ 1.28
CDPF1-202ENST00000381037 CD2BP2O95400 341 aaKnown RBP23.02■■□□□ 1.28
CDPF1-202ENST00000381037 ALDH5A1P51649 535 aaPredicted RBP23.02■■□□□ 1.28
CDPF1-202ENST00000381037 PWP2Q15269 919 aaKnown RBP23.02■■□□□ 1.28
CDPF1-202ENST00000381037 TAAR1Q96RJ0 339 aa23.02■■□□□ 1.28
CDPF1-202ENST00000381037 SLC26A6Q9BXS9 759 aa23.02■■□□□ 1.28
CDPF1-202ENST00000381037 KATNBL1Q9H079 304 aa23.02■■□□□ 1.28
CDPF1-202ENST00000381037 ADD3Q9UEY8 706 aaKnown RBP23.02■■□□□ 1.28
CDPF1-202ENST00000381037 NRBP1Q9UHY1 535 aa23.02■■□□□ 1.28
CDPF1-202ENST00000381037 DDX49Q9Y6V7 483 aaKnown RBP23.02■■□□□ 1.28
CDPF1-202ENST00000381037 PIK3CDO00329 1044 aa23.01■■□□□ 1.27
CDPF1-202ENST00000381037 MYCP01106 439 aaPredicted RBP23.01■■□□□ 1.27
CDPF1-202ENST00000381037 EDNRBP24530 442 aa23.01■■□□□ 1.27
CDPF1-202ENST00000381037 HOXA13P31271 388 aaPredicted RBP23.01■■□□□ 1.27
CDPF1-202ENST00000381037 PRAMEF19Q5SWL8 479 aa23.01■■□□□ 1.27
CDPF1-202ENST00000381037 PPP1R18Q6NYC8 613 aa23.01■■□□□ 1.27
CDPF1-202ENST00000381037 CPLX2Q6PUV4 134 aaKnown RBP23.01■■□□□ 1.27
CDPF1-202ENST00000381037 ARMCX2Q7L311 632 aa23.01■■□□□ 1.27
CDPF1-202ENST00000381037 SHISA4Q96DD7 197 aa23.01■■□□□ 1.27
CDPF1-202ENST00000381037 HMX1Q9NP08 348 aaPredicted RBP23.01■■□□□ 1.27
CDPF1-202ENST00000381037 RBBP6Q7Z6E9 1792 aaKnown RBP23.01■■□□□ 1.27
CDPF1-202ENST00000381037 KIAA0100Q14667 2235 aaKnown RBP23.01■■□□□ 1.27
CDPF1-202ENST00000381037 GCOM1H8Y6P7 765 aaPredicted RBP23■■□□□ 1.27
CDPF1-202ENST00000381037 POLR2MP0CAP2 368 aa23■■□□□ 1.27
CDPF1-202ENST00000381037 CCND3P30281 292 aaPredicted RBP23■■□□□ 1.27
CDPF1-202ENST00000381037 CDKN2AIPQ9NXV6 580 aaPredicted RBP23■■□□□ 1.27
CDPF1-202ENST00000381037 ASB14A6NK59 587 aa23■■□□□ 1.27
CDPF1-202ENST00000381037 ST18O60284 1047 aa23■■□□□ 1.27
CDPF1-202ENST00000381037 ZNF865P0CJ78 1059 aaPredicted RBP23■■□□□ 1.27
CDPF1-202ENST00000381037 SSRP1Q08945 709 aaKnown RBP23■■□□□ 1.27
CDPF1-202ENST00000381037 USP17L6PQ6QN14 398 aa23■■□□□ 1.27
CDPF1-202ENST00000381037 ZSCAN31Q96LW9 406 aaPredicted RBP23■■□□□ 1.27
CDPF1-202ENST00000381037 XRN2Q9H0D6 950 aaKnown RBP eCLIP23■■□□□ 1.27
CDPF1-202ENST00000381037 RNF208Q9H0X6 261 aa23■■□□□ 1.27
CDPF1-202ENST00000381037 PSTPIP2Q9H939 334 aa23■■□□□ 1.27
CDPF1-202ENST00000381037 DTNBO60941 627 aa22.99■■□□□ 1.27
CDPF1-202ENST00000381037 CDKL5O76039 1030 aa22.99■■□□□ 1.27
CDPF1-202ENST00000381037 GJB1P08034 283 aa22.99■■□□□ 1.27
CDPF1-202ENST00000381037 NAPAP54920 295 aa22.99■■□□□ 1.27
CDPF1-202ENST00000381037 AKAP17AQ02040 695 aaKnown RBP22.99■■□□□ 1.27
CDPF1-202ENST00000381037 TRIM22Q8IYM9 498 aa22.99■■□□□ 1.27
CDPF1-202ENST00000381037 RMDN3Q96TC7 470 aa22.99■■□□□ 1.27
CDPF1-202ENST00000381037 STK36Q9NRP7 1315 aa22.98■■□□□ 1.27
CDPF1-202ENST00000381037 DEXIO95424 95 aa22.98■■□□□ 1.27
CDPF1-202ENST00000381037 TEX2Q8IWB9 1127 aa22.98■■□□□ 1.27
CDPF1-202ENST00000381037 NSUN7Q8NE18 718 aaKnown RBP22.98■■□□□ 1.27
CDPF1-202ENST00000381037 ABHD16BQ9H3Z7 469 aa22.98■■□□□ 1.27
CDPF1-202ENST00000381037 RIC8AQ9NPQ8 531 aa22.98■■□□□ 1.27
CDPF1-202ENST00000381037 SH2B1Q9NRF2 756 aaPredicted RBP22.98■■□□□ 1.27
CDPF1-202ENST00000381037 ESYT2A0FGR8 921 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 CCDC85CA6NKD9 419 aa22.97■■□□□ 1.27
CDPF1-202ENST00000381037 FDPSP14324 419 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms