RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 A0A0G2JLW4 131 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 AKR1B1P15121 316 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 PLCG1P19174 1290 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 ANTXR2P58335 489 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 SNAP25P60880 206 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 SBK1Q52WX2 424 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 SFMBT2Q5VUG0 894 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 DYDC1Q8WWB3 177 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 MYL1P05976 194 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 HOXA13P31271 388 aaPredicted RBP13.56□□□□□ -0.24
GABPB1-203ENST00000380877 EVCP57679 992 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 ADAM9Q13443 819 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
GABPB1-203ENST00000380877 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 SORBS3O60504 671 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 COPB1P53618 953 aaKnown RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 NRBP1Q9UHY1 535 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 K7ENM7 598 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 TBC1D10BQ4KMP7 808 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 APBB1IPQ7Z5R6 666 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 DEPTORQ8TB45 409 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 SECISBP2LQ93073 1101 aaKnown RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 PAGE5Q96GU1 130 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 DHTKD1Q96HY7 919 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 ERICH4A6NGS2 130 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 TRPC3Q13507 836 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 ODR4Q5SWX8 454 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 STRIP1Q5VSL9 837 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 GJA10Q969M2 543 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 GUCY1A2P33402 732 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 ZNF658Q5TYW1 1059 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 CDAN1Q8IWY9 1227 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 MSANTD4Q8NCY6 345 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 ENOX1Q8TC92 643 aaKnown RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
GABPB1-203ENST00000380877 LSM14BQ9BX40 385 aaKnown RBP13.55□□□□□ -0.24
GABPB1-203ENST00000380877 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 FLT1P17948 1338 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 F5H6K3 240 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 GYS1P13807 737 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 KLRK1P26718 216 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 KLRC3Q07444 240 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 GOLGA5Q8TBA6 731 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 CNOT6LQ96LI5 555 aaKnown RBP13.54□□□□□ -0.24
GABPB1-203ENST00000380877 NOX5Q96PH1 765 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 TUBGCP2Q9BSJ2 902 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 DISC1Q9NRI5 854 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 KIF28PB7ZC32 967 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L10C9JJH3 530 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 BCRP11274 1271 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 STAG2Q8N3U4 1231 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
GABPB1-203ENST00000380877 P2RX5Q93086 422 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 CARD6Q9BX69 1037 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 FMR1NBQ8N0W7 255 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-203ENST00000380877 GOLPH3LQ9H4A5 285 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
GABPB1-203ENST00000380877 BARHL2Q9NY43 387 aa13.54□□□□□ -0.24
GABPB1-203ENST00000380877 TUBBP07437 444 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 SRBD1Q8N5C6 995 aaKnown RBP13.53□□□□□ -0.24
GABPB1-203ENST00000380877 IFIH1Q9BYX4 1025 aaKnown RBP13.53□□□□□ -0.24
GABPB1-203ENST00000380877 RASAL2Q9UJF2 1139 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 FGFR2P21802 821 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-203ENST00000380877 LRRC41Q15345 812 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 KRT222Q8N1A0 295 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 MEIS1O00470 390 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-203ENST00000380877 TNNC1P63316 161 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 AP3B2Q13367 1082 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 FAM83BQ5T0W9 1011 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 RCSD1Q6JBY9 416 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 USP17L6PQ6QN14 398 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 OSBPL5Q9H0X9 879 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-203ENST00000380877 HSF2BPO75031 334 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 EEF1GP26641 437 aaKnown RBP13.53□□□□□ -0.24
GABPB1-203ENST00000380877 SMC1AQ14683 1233 aaKnown RBP13.53□□□□□ -0.24
GABPB1-203ENST00000380877 CCDC50Q8IVM0 306 aa13.53□□□□□ -0.24
GABPB1-203ENST00000380877 SPOPO43791 374 aa13.52□□□□□ -0.24
GABPB1-203ENST00000380877 STX10O60499 249 aa13.52□□□□□ -0.24
GABPB1-203ENST00000380877 TNNI1P19237 187 aa13.52□□□□□ -0.24
GABPB1-203ENST00000380877 KCTD2Q14681 263 aa13.52□□□□□ -0.24
GABPB1-203ENST00000380877 SAMSN1Q9NSI8 373 aaKnown RBP13.52□□□□□ -0.24
GABPB1-203ENST00000380877 PLCB3Q01970 1234 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms