RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 BIN2Q9UBW5 565 aaPredicted RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 PDS5AQ29RF7 1337 aaKnown RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 BTAF1O14981 1849 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 PDE2AO00408 941 aaPredicted RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 TRIM21P19474 475 aaKnown RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 TTI2Q6NXR4 508 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 KIAA1328Q86T90 577 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 SMCR8Q8TEV9 937 aaPredicted RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 PIGSQ96S52 555 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 DUSP9Q99956 384 aaKnown RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 FAM204AQ9H8W3 233 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 CAPN11Q9UMQ6 739 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 SAR1BQ9Y6B6 198 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 DLEC1Q9Y238 1755 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 FLT1P17948 1338 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 ANKRD65E5RJM6 399 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 PLEKP08567 350 aaPredicted RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 ERCC3P19447 782 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 CALML3P27482 149 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 USP14P54578 494 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 ARL6IP4Q66PJ3 421 aaKnown RBP18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 TRIM34Q9BYJ4 488 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 PCDHA4Q9UN74 947 aa18.17■□□□□ 0.5
NKX3-1-201ENST00000380871 MYO1CO00159 1063 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 UBA7P41226 1012 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 TCP10Q12799 353 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 GRM4Q14833 912 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 KRT26Q7Z3Y9 468 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 CSGALNACT2Q8N6G5 542 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 TUBGCP2Q9BSJ2 902 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 HAUS4Q9H6D7 363 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 PCDHA6Q9UN73 950 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 PCDHA8Q9Y5H6 950 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 COL5A3P25940 1745 aaPredicted RBP18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 FCER1AP12319 257 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 SKIDA1Q1XH10 827 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 HSP90B2PQ58FF3 399 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 WDR93Q6P2C0 686 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 JAKMIP2Q96AA8 810 aa18.16■□□□□ 0.5
NKX3-1-201ENST00000380871 TXNRD1Q16881 649 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 CCDC178Q5BJE1 867 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 DPP8Q6V1X1 898 aaPredicted RBP18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 COA7Q96BR5 231 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 PCMTD1Q96MG8 357 aaPredicted RBP18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 KCNQ5Q9NR82 932 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 TMEM260Q9NX78 707 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 SMCO2A6NFE2 343 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 PPEF1O14829 653 aaPredicted RBP18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 SYF2O95926 243 aaKnown RBP18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 STK4Q13043 487 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 KRT27Q7Z3Y8 459 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 TTYH3Q9C0H2 523 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 NHEJ1Q9H9Q4 299 aaPredicted RBP18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 DBNDD1Q9H9R9 158 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 SPATA31A6Q5VVP1 1343 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 PSMA7O14818 248 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 RNF40O75150 1001 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 BBOX1O75936 387 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 PLCG1P19174 1290 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 C2orf54Q08AI8 447 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 SOGA3Q5TF21 947 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 ANKRD40Q6AI12 368 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 LEKR1Q6ZMV7 388 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 DRC1Q96MC2 740 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 DAGLAQ9Y4D2 1042 aa18.15■□□□□ 0.5
NKX3-1-201ENST00000380871 M0R2N6 131 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 CCNT1O60563 726 aaKnown RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 PPP4CP60510 307 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 GIMAP8Q8ND71 665 aaPredicted RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 MAGEC2Q9UBF1 373 aaPredicted RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 ZNF263O14978 683 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 EEF1GP26641 437 aaKnown RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 GNAQP50148 359 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 TSR1Q2NL82 804 aaKnown RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 FAM71BQ8TC56 605 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 PYM1Q9BRP8 204 aaKnown RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 GBP3Q9H0R5 595 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 USP40Q9NVE5 1235 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 KBTBD4Q9NVX7 518 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 SEC63Q9UGP8 760 aaKnown RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 RRP15Q9Y3B9 282 aaKnown RBP18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 PCDHAC2Q9Y5I4 1007 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 SCN7AQ01118 1682 aa18.14■□□□□ 0.49
NKX3-1-201ENST00000380871 GPR75-ASB3A0A0A6YYF3 556 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 A0A1W2PQC6 194 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 SRGNP10124 158 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 SLC16A2P36021 539 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 RHBDL3P58872 404 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 TBC1D8BQ0IIM8 1120 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 CNOT6LQ96LI5 555 aaKnown RBP18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 THAP9Q9H5L6 903 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 EXOC1Q9NV70 894 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 TNRC6CQ9HCJ0 1690 aaKnown RBP18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 RHOBTB3O94955 611 aa18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 EZH2Q15910 746 aaKnown RBP18.13■□□□□ 0.49
NKX3-1-201ENST00000380871 SRLQ86TD4 932 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms