RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 DYNC1LI2O43237 492 aaPredicted RBP20.22■□□□□ 0.83
HMGN1-204ENST00000380749 IGHDP01880 384 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 TAPT1Q6NXT6 567 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 SLC30A10Q6XR72 485 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 KIAA1211Q6ZU35 1233 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 TMEM199Q8N511 208 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 PURBQ96QR8 312 aaKnown RBP20.22■□□□□ 0.83
HMGN1-204ENST00000380749 SEZ6LQ9BYH1 1024 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 PDGFCQ9NRA1 345 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
HMGN1-204ENST00000380749 TANC1Q9C0D5 1861 aa20.22■□□□□ 0.83
HMGN1-204ENST00000380749 DLL1O00548 723 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 CALML3P27482 149 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 RNF207Q6ZRF8 634 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 DGKHQ86XP1 1220 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 ZKSCAN3Q9BRR0 538 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 PPP1R12CQ9BZL4 782 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 MYH7BA7E2Y1 1941 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 TTC28Q96AY4 2481 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 ITGA7Q13683 1181 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 PNMA1Q8ND90 353 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 CLEC4DQ8WXI8 215 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 DSCC1Q9BVC3 393 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 SEMA6BQ9H3T3 888 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 KAT14Q9H8E8 782 aa20.21■□□□□ 0.83
HMGN1-204ENST00000380749 TRIP12Q14669 1992 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-204ENST00000380749 KDM4AO75164 1064 aa20.2■□□□□ 0.82
HMGN1-204ENST00000380749 IMMTQ16891 758 aaKnown RBP20.2■□□□□ 0.82
HMGN1-204ENST00000380749 DUSP28Q4G0W2 176 aa20.2■□□□□ 0.82
HMGN1-204ENST00000380749 PSRC1Q6PGN9 363 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-204ENST00000380749 CDX2Q99626 313 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-204ENST00000380749 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.2■□□□□ 0.824e-7■■■□□ 15.1
HMGN1-204ENST00000380749 CTNNA3Q9UI47 895 aa20.2■□□□□ 0.82
HMGN1-204ENST00000380749 SCN5AQ14524 2016 aa20.2■□□□□ 0.82
HMGN1-204ENST00000380749 CHD9Q3L8U1 2897 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-204ENST00000380749 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-204ENST00000380749 B4DLN1 442 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 CD4P01730 458 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 GOLGA8HP0CJ92 632 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 PTGS1P23219 599 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
HMGN1-204ENST00000380749 RPS6P62753 249 aaKnown RBP20.19■□□□□ 0.82
HMGN1-204ENST00000380749 PDE4DQ08499 809 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 USH1GQ495M9 461 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 SLC43A3Q8NBI5 491 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 DNERQ8NFT8 737 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 WDR11Q9BZH6 1224 aa20.19■□□□□ 0.82
HMGN1-204ENST00000380749 TTYH1Q9H313 450 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-204ENST00000380749 RAD50Q92878 1312 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 NCOR1O75376 2440 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 B4E1Z4 1266 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 CSF2RAP15509 400 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 CPT1AP50416 773 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 PPP2R5BQ15173 497 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 KRT23Q9C075 422 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 POLR3EQ9NVU0 708 aa20.18■□□□□ 0.82
HMGN1-204ENST00000380749 DNAJB2P25686 324 aa20.17■□□□□ 0.82
HMGN1-204ENST00000380749 CDC37Q16543 378 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-204ENST00000380749 ASPRV1Q53RT3 343 aa20.17■□□□□ 0.82
HMGN1-204ENST00000380749 BRDTQ58F21 947 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-204ENST00000380749 OR6J1Q8NGC5 347 aa20.17■□□□□ 0.82
HMGN1-204ENST00000380749 ZSCAN10Q96SZ4 725 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-204ENST00000380749 HIPK3Q9H422 1215 aa20.17■□□□□ 0.82
HMGN1-204ENST00000380749 CNNM2Q9H8M5 875 aa20.17■□□□□ 0.82
HMGN1-204ENST00000380749 TNKSO95271 1327 aa20.17■□□□□ 0.82
HMGN1-204ENST00000380749 CHD7Q9P2D1 2997 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 RBM47A0AV96 593 aaKnown RBP20.16■□□□□ 0.82
HMGN1-204ENST00000380749 NKRFO15226 690 aaKnown RBP eCLIP20.16■□□□□ 0.82
HMGN1-204ENST00000380749 EDNRBP24530 442 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 CYP2C18P33260 490 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 TMEM240Q5SV17 173 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 TMEM63BQ5T3F8 832 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.16■□□□□ 0.82
HMGN1-204ENST00000380749 ENAHQ8N8S7 591 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-204ENST00000380749 SCFD2Q8WU76 684 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 MYLIPQ8WY64 445 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 ANKS1AQ92625 1134 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 UBAC1Q9BSL1 405 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 UBA5Q9GZZ9 404 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 MAF1Q9H063 256 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 MTIF3Q9H2K0 278 aaKnown RBP20.16■□□□□ 0.82
HMGN1-204ENST00000380749 ABCB11O95342 1321 aa20.16■□□□□ 0.82
HMGN1-204ENST00000380749 DHX16O60231 1041 aaKnown RBP20.15■□□□□ 0.82
HMGN1-204ENST00000380749 FOSL2P15408 326 aa20.15■□□□□ 0.82
HMGN1-204ENST00000380749 PSMC6P62333 389 aa20.15■□□□□ 0.82
HMGN1-204ENST00000380749 RGS22Q8NE09 1264 aa20.15■□□□□ 0.82
HMGN1-204ENST00000380749 MAFAQ8NHW3 353 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-204ENST00000380749 CPVLQ9H3G5 476 aa20.15■□□□□ 0.82
HMGN1-204ENST00000380749 IL23AQ9NPF7 189 aa20.15■□□□□ 0.82
HMGN1-204ENST00000380749 GPHNQ9NQX3 736 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-204ENST00000380749 GRIN2DO15399 1336 aa20.15■□□□□ 0.82
HMGN1-204ENST00000380749 B4GALT4O60513 344 aa20.14■□□□□ 0.81
HMGN1-204ENST00000380749 MYL3P08590 195 aa20.14■□□□□ 0.81
HMGN1-204ENST00000380749 PARP1P09874 1014 aaKnown RBP20.14■□□□□ 0.81
HMGN1-204ENST00000380749 ACRP10323 421 aa20.14■□□□□ 0.81
HMGN1-204ENST00000380749 TIFAQ96CG3 184 aa20.14■□□□□ 0.81
HMGN1-204ENST00000380749 ZSWIM5Q9P217 1185 aa20.14■□□□□ 0.81
HMGN1-204ENST00000380749 ZNF365Q70YC5 407 aa20.13■□□□□ 0.81
HMGN1-204ENST00000380749 C16orf59Q7L2K0 433 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms