RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PPP1R11O60927 126 aaPredicted RBP25.99■■□□□ 1.75
VPS16-201ENST00000380443 VIL1P09327 827 aaKnown RBP25.99■■□□□ 1.75
VPS16-201ENST00000380443 PLCG1P19174 1290 aa25.99■■□□□ 1.75
VPS16-201ENST00000380443 ADSSL1Q8N142 457 aa25.99■■□□□ 1.75
VPS16-201ENST00000380443 NELFBQ8WX92 580 aa25.99■■□□□ 1.75
VPS16-201ENST00000380443 LRRC27Q9C0I9 530 aa25.99■■□□□ 1.75
VPS16-201ENST00000380443 ADD3Q9UEY8 706 aaKnown RBP25.99■■□□□ 1.75
VPS16-201ENST00000380443 ARHGAP6O43182 974 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 TECP42680 631 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 SEPT2Q15019 361 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 POTEDQ86YR6 584 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 GIMAP8Q8ND71 665 aaPredicted RBP25.98■■□□□ 1.75
VPS16-201ENST00000380443 NOC3LQ8WTT2 800 aaKnown RBP25.98■■□□□ 1.75
VPS16-201ENST00000380443 PRMT6Q96LA8 375 aaPredicted RBP25.98■■□□□ 1.75
VPS16-201ENST00000380443 KLRC4O43908 158 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 STX10O60499 249 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 STX17P56962 302 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 TRAF1Q13077 416 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 KMT5BQ4FZB7 885 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 FKBP1CQ5VVH2 108 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 E4F1Q66K89 784 aaPredicted RBP25.98■■□□□ 1.75
VPS16-201ENST00000380443 SMYD4Q8IYR2 804 aaPredicted RBP25.98■■□□□ 1.75
VPS16-201ENST00000380443 DHTKD1Q96HY7 919 aaPredicted RBP25.98■■□□□ 1.75
VPS16-201ENST00000380443 LRWD1Q9UFC0 647 aa25.98■■□□□ 1.75
VPS16-201ENST00000380443 ITIH6Q6UXX5 1313 aa25.97■■□□□ 1.75
VPS16-201ENST00000380443 SLC16A2P36021 539 aa25.97■■□□□ 1.75
VPS16-201ENST00000380443 USP11P51784 963 aa25.97■■□□□ 1.75
VPS16-201ENST00000380443 COBLL1Q53SF7 1204 aa25.97■■□□□ 1.75
VPS16-201ENST00000380443 SIAH1Q8IUQ4 282 aa25.97■■□□□ 1.75
VPS16-201ENST00000380443 SPDYE2BA6NHP3 402 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 F5H6K3 240 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 SPDYE6P0CI01 402 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 PRCPP42785 496 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 TNNI2P48788 182 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 KLRC3Q07444 240 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 AP3B2Q13367 1082 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 QRICH1Q2TAL8 776 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 MOXD1Q6UVY6 613 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 ARHGAP27Q6ZUM4 889 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 GMLQ99445 158 aa25.96■■□□□ 1.75
VPS16-201ENST00000380443 PSMA7O14818 248 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 PBX1P40424 430 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 TXKP42681 527 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 BTNL9Q6UXG8 535 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 OGFOD1Q8N543 542 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 FAM151AQ8WW52 585 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 TRIM9Q9C026 710 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 PCDHA1Q9Y5I3 950 aa25.95■■□□□ 1.75
VPS16-201ENST00000380443 ZSCAN12O43309 604 aa25.95■■□□□ 1.74
VPS16-201ENST00000380443 HSP90AA4PQ58FG1 418 aa25.95■■□□□ 1.74
VPS16-201ENST00000380443 PANX2Q96RD6 677 aa25.95■■□□□ 1.74
VPS16-201ENST00000380443 CSRNP1Q96S65 589 aa25.95■■□□□ 1.74
VPS16-201ENST00000380443 MMTAG2Q9BU76 263 aaKnown RBP25.95■■□□□ 1.74
VPS16-201ENST00000380443 AMNQ9BXJ7 453 aa25.95■■□□□ 1.74
VPS16-201ENST00000380443 USP27XA6NNY8 438 aa25.94■■□□□ 1.74
VPS16-201ENST00000380443 DLGAP5Q15398 846 aa25.94■■□□□ 1.74
VPS16-201ENST00000380443 CDC37Q16543 378 aaPredicted RBP25.94■■□□□ 1.74
VPS16-201ENST00000380443 KRT79Q5XKE5 535 aa25.94■■□□□ 1.74
VPS16-201ENST00000380443 SV2BQ7L1I2 683 aa25.94■■□□□ 1.74
VPS16-201ENST00000380443 LARGE2Q8N3Y3 721 aa25.94■■□□□ 1.74
VPS16-201ENST00000380443 MTMR14Q8NCE2 650 aa25.94■■□□□ 1.74
VPS16-201ENST00000380443 CDK5RAP3Q96JB5 506 aa25.94■■□□□ 1.74
VPS16-201ENST00000380443 NAA15Q9BXJ9 866 aaKnown RBP25.94■■□□□ 1.74
VPS16-201ENST00000380443 DDX25Q9UHL0 483 aaKnown RBP25.94■■□□□ 1.74
VPS16-201ENST00000380443 GOLGA6L9A6NEM1 432 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 FAM196BA6NMK8 535 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 RIOK3O14730 519 aaKnown RBP25.93■■□□□ 1.74
VPS16-201ENST00000380443 EDIL3O43854 480 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 TDP2O95551 362 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 MMP14P50281 582 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 CNNM4Q6P4Q7 775 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 MTERF4Q7Z6M4 381 aaKnown RBP25.93■■□□□ 1.74
VPS16-201ENST00000380443 PPFIBP1Q86W92 1011 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 KIF18AQ8NI77 898 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 CCDC51Q96ER9 411 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 PPP1R13BQ96KQ4 1090 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 BAG1Q99933 345 aaPredicted RBP25.93■■□□□ 1.74
VPS16-201ENST00000380443 THAP9Q9H5L6 903 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.93■■□□□ 1.74
VPS16-201ENST00000380443 CYP3A7-CYP3A51PA0A087WV96 503 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 BICDL2A1A5D9 508 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 AKR1B15C9JRZ8 316 aaPredicted RBP25.93■■□□□ 1.74
VPS16-201ENST00000380443 FOSP01100 380 aaPredicted RBP25.93■■□□□ 1.74
VPS16-201ENST00000380443 CYP3A7P24462 503 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 TC2NQ8N9U0 490 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 AGBL3Q8NEM8 1001 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.93■■□□□ 1.74
VPS16-201ENST00000380443 EXOC1Q9NV70 894 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 TRMT1Q9NXH9 659 aaKnown RBP25.93■■□□□ 1.74
VPS16-201ENST00000380443 GDAQ9Y2T3 454 aa25.93■■□□□ 1.74
VPS16-201ENST00000380443 PVALEFA0A1B0GWK0 134 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 SLC37A4O43826 429 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 TPM1P09493 284 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 BMP3P12645 472 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 EEF1GP26641 437 aaKnown RBP25.92■■□□□ 1.74
VPS16-201ENST00000380443 TRIM14Q14142 442 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 TCP11X2Q5H9J9 407 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 MAP7D2Q96T17 732 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 ARHGEF10LQ9HCE6 1279 aa25.92■■□□□ 1.74
VPS16-201ENST00000380443 NDUFB10O96000 172 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms