RNA–Protein interactions for RNA: ENST00000380340.8

APH1B-202, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-202ENST00000380340 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
APH1B-202ENST00000380340 PTPRZ1P23471 2315 aaPredicted RBP12.36□□□□□ -0.43
APH1B-202ENST00000380340 SCN5AQ14524 2016 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 KPNA6O60684 536 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 EFCAB14O75071 495 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
APH1B-202ENST00000380340 MYL3P08590 195 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 PDE6AP16499 860 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 DEFB103AP81534 67 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 TTF1Q15361 905 aaPredicted RBP12.35□□□□□ -0.43
APH1B-202ENST00000380340 SMAD2Q15796 467 aaKnown RBP12.35□□□□□ -0.43
APH1B-202ENST00000380340 DUSP28Q4G0W2 176 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 BRDTQ58F21 947 aaPredicted RBP12.35□□□□□ -0.43
APH1B-202ENST00000380340 C12orf60Q5U649 245 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 CNKSR3Q6P9H4 555 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 ATOH1Q92858 354 aaPredicted RBP12.35□□□□□ -0.43
APH1B-202ENST00000380340 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
APH1B-202ENST00000380340 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 VTA1Q9NP79 307 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
APH1B-202ENST00000380340 FEM1BQ9UK73 627 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 MCM3APO60318 1980 aa12.35□□□□□ -0.43
APH1B-202ENST00000380340 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 NDUFB10O96000 172 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 FDX1P10109 184 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
APH1B-202ENST00000380340 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 FBXL6Q8N531 539 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 SAMD11Q96NU1 681 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
APH1B-202ENST00000380340 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 CLDND1Q9NY35 253 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
APH1B-202ENST00000380340 SURF6O75683 361 aaKnown RBP12.33□□□□□ -0.44
APH1B-202ENST00000380340 SELPP16109 830 aa12.33□□□□□ -0.44
APH1B-202ENST00000380340 IKBKEQ14164 716 aa12.33□□□□□ -0.44
APH1B-202ENST00000380340 TCEAL5Q5H9L2 206 aa12.33□□□□□ -0.44
APH1B-202ENST00000380340 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
APH1B-202ENST00000380340 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
APH1B-202ENST00000380340 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
APH1B-202ENST00000380340 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
APH1B-202ENST00000380340 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
APH1B-202ENST00000380340 ZNF532Q9HCE3 1301 aa12.33□□□□□ -0.44
APH1B-202ENST00000380340 TECTAO75443 2155 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 PROB1E7EW31 1015 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 CXCL10P02778 98 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 CT47B1P0C2W7 299 aaPredicted RBP12.32□□□□□ -0.44
APH1B-202ENST00000380340 SLFN5Q08AF3 891 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 GPNMBQ14956 572 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 PTGISQ16647 500 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 EPC2Q52LR7 807 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 POTEHQ6S545 545 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 WDR11Q9BZH6 1224 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
APH1B-202ENST00000380340 ARMT1Q9H993 441 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 RNF146Q9NTX7 359 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 RAD50Q92878 1312 aa12.32□□□□□ -0.44
APH1B-202ENST00000380340 DCHS1Q96JQ0 3298 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 H3BNC9 293 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 PRKAB2O43741 272 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 LTBRP36941 435 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 GPM6BQ13491 265 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 LRRC8DQ7L1W4 858 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 OR6J1Q8NGC5 347 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 SSH3Q8TE77 659 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 ALG13Q9NP73 1137 aaKnown RBP12.31□□□□□ -0.44
APH1B-202ENST00000380340 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
APH1B-202ENST00000380340 MYO15AQ9UKN7 3530 aa12.31□□□□□ -0.44
APH1B-202ENST00000380340 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
APH1B-202ENST00000380340 STXBP3O00186 592 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 MBTPS2O43462 519 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 NUBP1P53384 320 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 ZXDAP98168 799 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 CTC1Q2NKJ3 1217 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 RPAINQ86UA6 219 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
APH1B-202ENST00000380340 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 TET1Q8NFU7 2136 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
APH1B-202ENST00000380340 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 TRERF1Q96PN7 1200 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 SYNPO2Q9UMS6 1093 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
APH1B-202ENST00000380340 SIP14410 1827 aa12.3□□□□□ -0.44
APH1B-202ENST00000380340 TANC1Q9C0D5 1861 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms