RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 MTMR9Q96QG7 549 aa13.52□□□□□ -0.24
USP3-202ENST00000380324 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.24
USP3-202ENST00000380324 DDX25Q9UHL0 483 aaKnown RBP13.52□□□□□ -0.24
USP3-202ENST00000380324 SRCAPQ6ZRS2 3230 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 UQCRHLA0A096LP55 91 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 UQCRHP07919 91 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 BMP3P12645 472 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 PAK1Q13153 545 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 ZYXQ15942 572 aaKnown RBP13.52□□□□□ -0.25
USP3-202ENST00000380324 FAM151AQ8WW52 585 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 GMCL1Q96IK5 515 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 MMTAG2Q9BU76 263 aaKnown RBP13.52□□□□□ -0.25
USP3-202ENST00000380324 KBTBD4Q9NVX7 518 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 TRMT1Q9NXH9 659 aaKnown RBP13.52□□□□□ -0.25
USP3-202ENST00000380324 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.25
USP3-202ENST00000380324 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 KMT5BQ4FZB7 885 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
USP3-202ENST00000380324 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 ACER1Q8TDN7 264 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 PRCPP42785 496 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 CT47A1Q5JQC4 288 aaPredicted RBP13.51□□□□□ -0.25
USP3-202ENST00000380324 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
USP3-202ENST00000380324 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 ARHGEF10LQ9HCE6 1279 aa13.51□□□□□ -0.25
USP3-202ENST00000380324 MARCH6O60337 910 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 POLD1P28340 1107 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.25
USP3-202ENST00000380324 ASIC1P78348 528 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 CDKAL1Q5VV42 579 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 CREBRFQ8IUR6 639 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 AGBL3Q8NEM8 1001 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 JDP2Q8WYK2 163 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 ANO3Q9BYT9 981 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 ATAD5Q96QE3 1844 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 TRIM49BA6NDI0 452 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 WNT10BO00744 389 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 PRKCSHP14314 528 aaPredicted RBP13.5□□□□□ -0.25
USP3-202ENST00000380324 CCT6AP40227 531 aaKnown RBP13.5□□□□□ -0.25
USP3-202ENST00000380324 KIAA1755Q5JYT7 1200 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 CIAPIN1Q6FI81 312 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 PPP4R3AQ6IN85 833 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
USP3-202ENST00000380324 FBXO11Q86XK2 927 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 SNX29Q8TEQ0 813 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 TRIM9Q9C026 710 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 CUEDC2Q9H467 287 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 RWDD2AQ9UIY3 292 aa13.5□□□□□ -0.25
USP3-202ENST00000380324 MEIS2O14770 477 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 NRDCO43847 1150 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 KLRC4O43908 158 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 STAT2P52630 851 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 TGFB2P61812 414 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 GRB10Q13322 594 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 FAM83BQ5T0W9 1011 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 SPECC1LQ69YQ0 1117 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 APTXQ7Z2E3 356 aaKnown RBP13.49□□□□□ -0.25
USP3-202ENST00000380324 FBXO41Q8TF61 875 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 MAGEF1Q9HAY2 307 aa13.49□□□□□ -0.25
USP3-202ENST00000380324 A0A1B0GTH6 734 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 TEX33O43247 280 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 MYL1P05976 194 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 TPM2P07951 284 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 HAS1Q92839 578 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 P2RX7Q99572 595 aaKnown RBP13.48□□□□□ -0.25
USP3-202ENST00000380324 NUDT12Q9BQG2 462 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 MYOZ2Q9NPC6 264 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 EXOC1Q9NV70 894 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 PRR12Q9ULL5 1215 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 BCS1LQ9Y276 419 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 NFKBIEO00221 500 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 EGFRP00533 1210 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 TNNT1P13805 278 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 GCFC2P16383 781 aaKnown RBP13.48□□□□□ -0.25
USP3-202ENST00000380324 HOXA13P31271 388 aaPredicted RBP13.48□□□□□ -0.25
USP3-202ENST00000380324 PDE4DQ08499 809 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 KCNB1Q14721 858 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 CCAR2Q8N163 923 aaKnown RBP13.48□□□□□ -0.25
USP3-202ENST00000380324 MTFR1LQ9H019 292 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 VPS33BQ9H267 617 aa13.48□□□□□ -0.25
USP3-202ENST00000380324 RHOBTB3O94955 611 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 TERF1P54274 439 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
USP3-202ENST00000380324 MCM6Q14566 821 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 NR1I3Q14994 352 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 KRT79Q5XKE5 535 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 E4F1Q66K89 784 aaPredicted RBP13.47□□□□□ -0.25
USP3-202ENST00000380324 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
USP3-202ENST00000380324 HPS3Q969F9 1004 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 GLIS2Q9BZE0 524 aaPredicted RBP13.47□□□□□ -0.25
USP3-202ENST00000380324 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
USP3-202ENST00000380324 ADKP55263 362 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms